RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 FXYD3Q14802 87 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 GGNBP1Q5YKI7 109 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 ZNF429Q86V71 674 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 OR5B3Q8NH48 314 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 OR1S1Q8NH92 325 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 OR2T6Q8NHC8 308 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 GPR146Q96CH1 333 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 MED28Q9H204 178 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 TMEM14BQ9NUH8 114 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 ZNF257Q9Y2Q1 563 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 C5orf51A6NDU8 294 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 AP4M1O00189 453 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 ADAP1O75689 374 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 NDUFA7O95182 113 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 IL6RP08887 468 aaPredicted RBP11.2□□□□□ -0.62
SDC2-203ENST00000519587 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
SDC2-203ENST00000519587 CX3CL1P78423 397 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 PJVKQ0ZLH3 352 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 GSG1LQ6UXU4 331 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 Q8N2B8 174 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 OR1L8Q8NGR8 309 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 OR4F5Q8NH21 305 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 GRPEL2Q8TAA5 225 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 SRSF12Q8WXF0 261 aaKnown RBP11.2□□□□□ -0.62
SDC2-203ENST00000519587 QTRT1Q9BXR0 403 aaKnown RBP11.2□□□□□ -0.62
SDC2-203ENST00000519587 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 PARP11Q9NR21 331 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 OR51B2Q9Y5P1 312 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 PLXNB1O43157 2135 aa11.2□□□□□ -0.62
SDC2-203ENST00000519587 IGHV7-81A0A0B4J1V7 117 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 A0A0G2JRQ6 117 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 FAM25EA8MYX2 175 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 FCN1O00602 326 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 GOSR2O14653 212 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 IFNA17P01571 189 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 IGHG2P01859 326 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 VDAC2P45880 294 aaPredicted RBP11.19□□□□□ -0.62
SDC2-203ENST00000519587 BLCAPP62952 87 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 IZUMO4Q1ZYL8 232 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 IAH1Q2TAA2 248 aaPredicted RBP11.19□□□□□ -0.62
SDC2-203ENST00000519587 HSD17B13Q7Z5P4 300 aaPredicted RBP11.19□□□□□ -0.62
SDC2-203ENST00000519587 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 GON7Q9BXV9 100 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 NSG2Q9Y328 171 aa11.19□□□□□ -0.62
SDC2-203ENST00000519587 TRAV3A0A0B4J244 114 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 C13orf42A0A1B0GVH6 325 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 SH2D7A6NKC9 451 aaPredicted RBP11.18□□□□□ -0.62
SDC2-203ENST00000519587 FAM90A26D6RGX4 464 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 CCSO14618 274 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 TSPAN9O75954 239 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 TMEM267Q0VDI3 215 aaPredicted RBP11.18□□□□□ -0.62
SDC2-203ENST00000519587 AARDQ4LEZ3 155 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 Q6ZSV7 163 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 OR5M8Q8NGP6 311 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 FYTTD1Q96QD9 318 aaKnown RBP11.18□□□□□ -0.62
SDC2-203ENST00000519587 SRSF8Q9BRL6 282 aaKnown RBP11.18□□□□□ -0.62
SDC2-203ENST00000519587 HINT2Q9BX68 163 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 ENY2Q9NPA8 101 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 MGAT4CQ9UBM8 478 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 ZNF580Q9UK33 172 aa11.18□□□□□ -0.62
SDC2-203ENST00000519587 A0A1W2PN81 502 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 ATP6V0E1O15342 81 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 ST8SIA3O43173 380 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 MED6O75586 246 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 TRAPPC2P0DI81 140 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 TRAPPC2BP0DI82 140 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 CHRNA7P36544 502 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
SDC2-203ENST00000519587 SPCS3P61009 180 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 HSPE1P61604 102 aaKnown RBP11.17□□□□□ -0.62
SDC2-203ENST00000519587 RRAS2P62070 204 aaPredicted RBP11.17□□□□□ -0.62
SDC2-203ENST00000519587 CYCSP99999 105 aaKnown RBP11.17□□□□□ -0.62
SDC2-203ENST00000519587 NDPQ00604 133 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 MRGPRG-AS1Q2M3A8 158 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 C10orf55Q5SWW7 151 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 Q6ZNX1 250 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 OR52E5Q8NH55 327 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 SGMS2Q8NHU3 365 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 TMEM158Q8WZ71 300 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 C2orf50Q96LR7 162 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 TMEM68Q96MH6 324 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 C16orf95Q9H693 158 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
SDC2-203ENST00000519587 TET2Q6N021 2002 aaPredicted RBP11.17□□□□□ -0.62
SDC2-203ENST00000519587 TEX50A0A1B0GTY4 177 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 A0A1B0GUS0 222 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 WRBO00258 174 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 IGF1P05019 195 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 HOXA1P49639 335 aaPredicted RBP11.16□□□□□ -0.62
SDC2-203ENST00000519587 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
SDC2-203ENST00000519587 PRCDQ00LT1 54 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 TNFRSF9Q07011 255 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 ECSCRQ19T08 205 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 Q6ZRM9 215 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 ZBTB8BQ8NAP8 495 aaPredicted RBP11.16□□□□□ -0.62
SDC2-203ENST00000519587 ZFP57Q9NU63 452 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 GSKIPQ9P0R6 139 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 HSPB7Q9UBY9 170 aa11.16□□□□□ -0.62
SDC2-203ENST00000519587 TRAV41A0A0B4J266 112 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms