RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RTEL1-TNFRSF6BF6WH68 1400 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 PIK3C2GO75747 1445 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 ANKRD30AQ9BXX3 1397 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 IGLV3-9A0A075B6K5 115 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 OR7C1O76099 320 aaPredicted RBP1.78□□□□□ -2.12
PTPN12-213ENST00000519553 APOMO95445 188 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 FAM228BP0C875 321 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 HIST1H1TP22492 207 aaPredicted RBP1.78□□□□□ -2.12
PTPN12-213ENST00000519553 OR10J1P30954 320 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 MAP2K4P45985 399 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 IAH1Q2TAA2 248 aaPredicted RBP1.78□□□□□ -2.12
PTPN12-213ENST00000519553 C5orf46Q6UWT4 87 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 Q6ZRN7 208 aaPredicted RBP1.78□□□□□ -2.12
PTPN12-213ENST00000519553 Q6ZSA8 131 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 C20orf196Q8IYI0 205 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 OR51D1Q8NGF3 324 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 OR2D3Q8NGH3 330 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 NEK7Q8TDX7 302 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 FAM172AQ8WUF8 416 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 SFRP2Q96HF1 295 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 SIGMAR1Q99720 223 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 BOLA2Q9H3K6 86 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 ARMC1Q9NVT9 282 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 DOK5Q9P104 306 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 SMPXQ9UHP9 88 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 HHLA2Q9UM44 414 aa1.78□□□□□ -2.12
PTPN12-213ENST00000519553 CR1P17927 2039 aa1.78□□□□□ -2.13
PTPN12-213ENST00000519553 NCKAP5O14513 1909 aa1.78□□□□□ -2.13
PTPN12-213ENST00000519553 HELZ2Q9BYK8 2649 aaKnown RBP1.77□□□□□ -2.13
PTPN12-213ENST00000519553 GRIN2BQ13224 1484 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 WRNQ14191 1432 aaPredicted RBP eCLIP1.77□□□□□ -2.13
PTPN12-213ENST00000519553 LINC00862A6NCI5 91 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 OR4C46A6NHA9 309 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 FAM159BA6NKW6 160 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 OR4C45A6NMZ5 311 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 INMT-MINDY4F8WBC2 141 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 H0YJX3 145 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 M0R381 172 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 FAAHO00519 579 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 DAPP51397 102 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 TNFAIP6P98066 277 aaPredicted RBP1.77□□□□□ -2.13
PTPN12-213ENST00000519553 CDK10Q15131 360 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 TEX36Q5VZQ5 186 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 LPCAT3Q6P1A2 487 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.77□□□□□ -2.13
PTPN12-213ENST00000519553 LHFPL5Q8TAF8 219 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 PHB2Q99623 299 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 CMSS1Q9BQ75 279 aaKnown RBP1.77□□□□□ -2.13
PTPN12-213ENST00000519553 TMEM109Q9BVC6 243 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 MND1Q9BWT6 205 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 GID8Q9NWU2 228 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 NDUFB11Q9NX14 153 aa1.77□□□□□ -2.13
PTPN12-213ENST00000519553 MTUS2Q5JR59 1369 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 TMED7-TICAM2A0A0A6YYA0 188 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 IGHV1-69-2A0A0G2JMI3 117 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 OR6C6A6NF89 314 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 C11orf86A6NJI1 115 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 RPSAP08865 295 aaKnown RBP1.76□□□□□ -2.13
PTPN12-213ENST00000519553 CD7P09564 240 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 FGF6P10767 208 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 KCNE1P15382 129 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 CA7P43166 264 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 BTN3A2P78410 334 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 HOXC5Q00444 222 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 RUNX1Q01196 453 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 TAC4Q86UU9 113 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 OOSP2Q86WS3 158 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 OR52L1Q8NGH7 329 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 OR2T27Q8NH04 317 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 FNDC9Q8TBE3 224 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 PPP1R2P1Q96PQ5 205 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 CCL13Q99616 98 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 HOPXQ9BPY8 73 aaPredicted RBP1.76□□□□□ -2.13
PTPN12-213ENST00000519553 KIFC1Q9BW19 673 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 MRPL40Q9NQ50 206 aaKnown RBP1.76□□□□□ -2.13
PTPN12-213ENST00000519553 TAAR3PQ9P1P4 343 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 DNAJC12Q9UKB3 198 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 ANAPC10Q9UM13 185 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 PXMP4Q9Y6I8 212 aa1.76□□□□□ -2.13
PTPN12-213ENST00000519553 DICER1Q9UPY3 1922 aaKnown RBP1.76□□□□□ -2.13
PTPN12-213ENST00000519553 PBRM1Q86U86 1689 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 GNRH2O43555 120 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 GSTZ1O43708 216 aaPredicted RBP1.75□□□□□ -2.13
PTPN12-213ENST00000519553 CCL3P10147 92 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 NPPCP23582 126 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 CRHBPP24387 322 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 SNRPD2P62316 118 aaKnown RBP1.75□□□□□ -2.13
PTPN12-213ENST00000519553 CAV1Q03135 178 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 C9orf64Q5T6V5 341 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 AGTRAPQ6RW13 159 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 SMIM15Q7Z3B0 74 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 C1orf174Q8IYL3 243 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 OR4X2Q8NGF9 303 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 OR2T4Q8NH00 348 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 MCFD2Q8NI22 146 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 TEX47Q8TBZ9 253 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 DDA1Q9BW61 102 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 NKX6-2Q9C056 277 aaPredicted RBP1.75□□□□□ -2.13
PTPN12-213ENST00000519553 TRABDQ9H4I3 376 aa1.75□□□□□ -2.13
PTPN12-213ENST00000519553 AK3Q9UIJ7 227 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms