RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 AHSA2Q719I0 299 aa9.04□□□□□ -0.96
TRAPPC9-204ENST00000518723 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
TRAPPC9-204ENST00000518723 CYGBQ8WWM9 190 aa9.04□□□□□ -0.96
TRAPPC9-204ENST00000518723 FKBP14Q9NWM8 211 aa9.04□□□□□ -0.96
TRAPPC9-204ENST00000518723 IGLV2-14P01704 120 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 HLA-DQB1P01920 261 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 REG1AP05451 166 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 HLA-GP17693 338 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 CLDN12P56749 244 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 BRWD1-AS2P59051 145 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 APRG1Q8IVJ8 170 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 HSD17B10Q99714 261 aaKnown RBP9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 MND1Q9BWT6 205 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 HRH4Q9H3N8 390 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 THYN1Q9P016 225 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 RAB22AQ9UL26 194 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 AK6Q9Y3D8 172 aaKnown RBP9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 OR2W1Q9Y3N9 320 aa9.03□□□□□ -0.96
TRAPPC9-204ENST00000518723 IGKV1D-8A0A087WSZ0 117 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 TMEM272A0A1B0GTI8 110 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 K7EMT4 169 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 NDUFA4O00483 81 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 XRCC3O43542 346 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 HRASP01112 189 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 CTSDP07339 412 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 HIST1H1DP16402 221 aaKnown RBP9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 GNB3P16520 340 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 CRHBPP24387 322 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 GADD45AP24522 165 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 CMC4P56277 68 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 PLA2G7Q13093 441 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 TMEM91Q6ZNR0 172 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 OR10R2Q8NGX6 335 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 OR4A5Q8NH83 315 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 VN1R17PQ8TDU5 208 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 ATP6V0BQ99437 205 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 SRSF8Q9BRL6 282 aaKnown RBP9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 BET1LQ9NYM9 111 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 LSM2Q9Y333 95 aaKnown RBP9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 HSPG2P98160 4391 aa9.02□□□□□ -0.97
TRAPPC9-204ENST00000518723 IGLC7A0M8Q6 106 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 RAB27BO00194 218 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 ARL6IP5O75915 188 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 RPA2P15927 270 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 OR2B8PP59922 312 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 SPHARQ15513 63 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 SPSB3Q6PJ21 355 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 SSX9Q7RTT3 188 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 DHRSXQ8N5I4 330 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 TCTEX1D2Q8WW35 142 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 BSCL2Q96G97 398 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
TRAPPC9-204ENST00000518723 IGKV1D-13A0A0B4J2D9 117 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 OR2T8A6NH00 312 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 PRSS29PA6NIE9 313 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 J3QRK9 145 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 RTL8CO15255 209 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 DEFB4AO15263 64 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 CTXN2P0C2S0 81 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 IGKV1-13P0DP09 117 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 DTYMKP23919 212 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 TALDO1P37837 337 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 ZNF124Q15973 351 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 TIMM50Q3ZCQ8 353 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 LIPKQ5VXJ0 399 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 C8orf59Q8N0T1 100 aaPredicted RBP9□□□□□ -0.97
TRAPPC9-204ENST00000518723 MFSD4AQ8N468 514 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 BPIFB6Q8NFQ5 453 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 TMEM203Q969S6 136 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 AIFM2Q9BRQ8 373 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 C8orf4Q9NR00 106 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 SPATA2Q9UM82 520 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 ETV7Q9Y603 341 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 V9GY05 133 aa9□□□□□ -0.97
TRAPPC9-204ENST00000518723 C15orf62A8K5M9 175 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 CYB5BO43169 146 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 MRPS14O60783 128 aaKnown RBP8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 CA1P00915 261 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 FGF2P09038 288 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 GNAO1P09471 354 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 NFYAP23511 347 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 TMEM187Q14656 261 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 TRAM1Q15629 374 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 ZNF66Q6ZN08 573 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 NR2C2APQ86WQ0 139 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 PACRGLQ8N7B6 248 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 GDPD1Q8N9F7 314 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 Q8NAQ8 132 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 UFD1Q92890 307 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 RNF2Q99496 336 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 C20orf24Q9BUV8 137 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 SMPXQ9UHP9 88 aa8.99□□□□□ -0.97
TRAPPC9-204ENST00000518723 A0A075B6Q4 140 aa8.98□□□□□ -0.97
TRAPPC9-204ENST00000518723 IGHV4-4A0A075B6R2 117 aa8.98□□□□□ -0.97
TRAPPC9-204ENST00000518723 F8W735 103 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC9-204ENST00000518723 RAB6AP20340 208 aa8.98□□□□□ -0.97
TRAPPC9-204ENST00000518723 PSMA1P25786 263 aaKnown RBP8.98□□□□□ -0.97
TRAPPC9-204ENST00000518723 CALRP27797 417 aaKnown RBP8.98□□□□□ -0.97
TRAPPC9-204ENST00000518723 ARL6IP1Q15041 203 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms