RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 DMBX1Q8NFW5 382 aa10.8□□□□□ -0.68
PDGFRB-202ENST00000517488 DYNC2LI1Q8TCX1 351 aa10.8□□□□□ -0.68
PDGFRB-202ENST00000517488 RSRP1Q9BUV0 290 aa10.8□□□□□ -0.68
PDGFRB-202ENST00000517488 COMMD9Q9P000 198 aa10.8□□□□□ -0.68
PDGFRB-202ENST00000517488 MTFP1Q9UDX5 166 aa10.8□□□□□ -0.68
PDGFRB-202ENST00000517488 ZNF256Q9Y2P7 627 aaPredicted RBP10.8□□□□□ -0.68
PDGFRB-202ENST00000517488 ZNF257Q9Y2Q1 563 aa10.8□□□□□ -0.68
PDGFRB-202ENST00000517488 DPPA5A6NC42 116 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 CD3DP04234 171 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 REG1AP05451 166 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 CRYGCP07315 174 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 PSMB6P28072 239 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 UCP3P55916 312 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 SYNJ2BPP57105 145 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 EXOSC2Q13868 293 aaKnown RBP10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 HAPLN4Q86UW8 402 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 NECAP1Q8NC96 275 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 FANCD2OSQ96PS1 177 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 BCL7BQ9BQE9 202 aa10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 CCDC59Q9P031 241 aaKnown RBP10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 LSM4Q9Y4Z0 139 aaKnown RBP10.79□□□□□ -0.68
PDGFRB-202ENST00000517488 MARCH11A6NNE9 402 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 NDUFB8O95169 186 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 LY86O95711 162 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 KRASP01116 189 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 SPNP16150 400 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 CTRB1P17538 263 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 ERVK-16P61578 105 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 C15orf32Q32M92 178 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 RNASE10Q5GAN6 216 aaKnown RBP10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 CTRB2Q6GPI1 263 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 LPCAT3Q6P1A2 487 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 IL34Q6ZMJ4 242 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 TBC1D26Q86UD7 250 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 SLC38A6Q8IZM9 456 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 OR4D10Q8NGI6 311 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 C15orf40Q8WUR7 153 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 OR4C12Q96R67 309 aa10.78□□□□□ -0.68
PDGFRB-202ENST00000517488 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 IGLC7A0M8Q6 106 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 H3BMQ9 156 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 GABARAPH6UMI1 98 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 BMPR1BO00238 502 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 IFNA6P05013 189 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 PI3P19957 117 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 G6PCP35575 357 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 RPEL1Q2QD12 228 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 LHFPL1Q86WI0 220 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 ISOC1Q96CN7 298 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 B9D2Q9BPU9 175 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 ELOVL1Q9BW60 279 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 COMMD5Q9GZQ3 224 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 FBXL7Q9UJT9 491 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 NSG2Q9Y328 171 aa10.77□□□□□ -0.69
PDGFRB-202ENST00000517488 SORL1Q92673 2214 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 TEX50A0A1B0GTY4 177 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 IGHV3-23P01764 117 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 CD74P04233 296 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 FGF2P09038 288 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 PGAM2P15259 253 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 TBPP20226 339 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 S100GP29377 79 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 DCTN2Q13561 401 aaKnown RBP10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 KLK9Q2XQG4 91 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 TMEM229BQ8NBD8 167 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 OR10W1Q8NGF6 305 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 OR9G4Q8NGQ1 327 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 OR6Q1Q8NGQ2 317 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 QTRT1Q9BXR0 403 aaKnown RBP10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 SLIRPQ9GZT3 109 aaKnown RBP10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 KLK9Q9UKQ9 250 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 DMRT1Q9Y5R6 373 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 CEPT1Q9Y6K0 416 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 S4R3C0 116 aa10.76□□□□□ -0.69
PDGFRB-202ENST00000517488 IGLV11-55A0A075B6I3 123 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 PPP5D1E7EU14 171 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 NOL3O60936 208 aaKnown RBP10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 RAB3DO95716 219 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 DHFRP00374 187 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 IGKV1-39P01597 117 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 HLA-AP01891 365 aaKnown RBP10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 IGKV1D-39P04432 117 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 TRAPPC2P0DI81 140 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 TRAPPC2BP0DI82 140 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 DEFA4P12838 97 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 TAS2R19P59542 299 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 CD69Q07108 199 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 C11orf87Q6NUJ2 197 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 CADM3Q8N126 398 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 ARRDC1Q8N5I2 433 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 DIRAS2Q96HU8 199 aa10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 C6orf62Q9GZU0 229 aaPredicted RBP10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 FAM212BQ9NTI7 297 aaPredicted RBP10.75□□□□□ -0.69
PDGFRB-202ENST00000517488 DBX1A6NMT0 343 aa10.74□□□□□ -0.69
PDGFRB-202ENST00000517488 SNAPC5O75971 98 aa10.74□□□□□ -0.69
PDGFRB-202ENST00000517488 IGLV1-51P01701 117 aa10.74□□□□□ -0.69
PDGFRB-202ENST00000517488 CSN3P07498 182 aa10.74□□□□□ -0.69
PDGFRB-202ENST00000517488 GP9P14770 177 aa10.74□□□□□ -0.69
PDGFRB-202ENST00000517488 PPP5CP53041 499 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms