RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 Q8WTZ3 238 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 FBXL15Q9H469 300 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 CEP295Q9C0D2 2601 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 DNAH1Q9P2D7 4330 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 TVP23AA6NH52 213 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 FAM183AA6NL82 134 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 SNNO75324 88 aaPredicted RBP-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 MPDU1O75352 247 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 CDK14O94921 469 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 GCGP01275 180 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 SRMP19623 302 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 ATP5G3P48201 142 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 XIAPP98170 497 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 DEFB128Q7Z7B8 93 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR13C2Q8NGS9 318 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR13C9Q8NGT0 318 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR11L1Q8NGX0 322 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 PPTC7Q8NI37 304 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 ITFG1Q8TB96 612 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 MED28Q9H204 178 aa-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 TNS1Q9HBL0 1735 aaKnown RBP-3.65□□□□□ -2.99
RNU6-539P-201ENST00000516665 A0A1W2PRS3 328 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 K7EQM0 130 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 ZZEF1O43149 2961 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 UGT2B11O75310 529 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 HIST1H1CP16403 213 aaKnown RBP-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 HLA-DMBP28068 263 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 CAMLGP49069 296 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 STX3Q13277 289 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 CTSL3PQ5NE16 218 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 OFCC1Q8IZS5 231 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 XPO6Q96QU8 1125 aaKnown RBP-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 C6orf50Q9HD87 102 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 ISY1Q9ULR0 285 aaKnown RBP-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 EPDR1Q9UM22 224 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 DNAH7Q8WXX0 4024 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 MYO15BQ96JP2 1530 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 MYLKQ15746 1914 aa-3.66□□□□□ -3
RNU6-539P-201ENST00000516665 M0R1B8 84 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 PSMD11O00231 422 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 TRDMT1O14717 391 aaKnown RBP-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 LEPROTO15243 131 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 GSTZ1O43708 216 aaPredicted RBP-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 NSA2O95478 260 aaKnown RBP-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 EPPINO95925 133 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 OR5AL1P0C617 328 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 F8A1P23610 371 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 GCLMP48507 274 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 PPP1R1AQ13522 171 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 C5orf64Q2M2E5 130 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 DEFB112Q30KQ8 113 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 KRTAP20-1Q3LI63 56 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 FOXI2Q6ZQN5 318 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 SPATA24Q86W54 205 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 JAGN1Q8N5M9 183 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 OR52K2Q8NGK3 314 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 FAM111AQ96PZ2 611 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 SUCNR1Q9BXA5 334 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 NINJ2Q9NZG7 142 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 V9GYY5 206 aaPredicted RBP-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 KNL1Q8NG31 2342 aa-3.67□□□□□ -3
RNU6-539P-201ENST00000516665 TRAV3A0A0B4J244 114 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 HACD1B0YJ81 288 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 C9JCJ5 164 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 IGLV1-51P01701 117 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 FAM228BP0C875 321 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 BGNP21810 368 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 OR10J1P30954 320 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 RRM2P31350 389 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 MRPL19P49406 292 aaKnown RBP-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 KISS1Q15726 138 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 OR52R1Q8NGF1 315 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 TLCD1Q96CP7 247 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 OR52A1Q9UKL2 312 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 BOKQ9UMX3 212 aaPredicted RBP-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 RRP15Q9Y3B9 282 aaKnown RBP-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 EYSQ5T1H1 3165 aa-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 UTP20O75691 2785 aaKnown RBP-3.68□□□□□ -3
RNU6-539P-201ENST00000516665 HEATR9A2RTY3 570 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 M0R233 179 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 SULT1C2O00338 296 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 FIBPO43427 364 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 HUS1O60921 280 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 PROSCO94903 275 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 IGHV3-7P01780 117 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 MBP02144 154 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 MYL2P10916 166 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 CD79AP11912 226 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 AKR1C4P17516 323 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 RPS4Y1P22090 263 aaKnown RBP-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 TUBG1P23258 451 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 CD151P48509 253 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 C1QTNF8P60827 252 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 GMFBP60983 142 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 TSPAN5P62079 268 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 BSXQ3C1V8 233 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 HSDL1Q3SXM5 330 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 XAF1Q6GPH4 301 aa-3.69□□□□□ -3
RNU6-539P-201ENST00000516665 SLC25A24Q6NUK1 477 aa-3.69□□□□□ -3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms