RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF735P0CB33 412 aa8.79□□□□□ -1
VCAN-212ENST00000515397 F2RP25116 425 aa8.79□□□□□ -1
VCAN-212ENST00000515397 TAS2R31P59538 309 aa8.79□□□□□ -1
VCAN-212ENST00000515397 OR2B8PP59922 312 aa8.79□□□□□ -1
VCAN-212ENST00000515397 KLF5Q13887 457 aaPredicted RBP8.79□□□□□ -1
VCAN-212ENST00000515397 C15orf32Q32M92 178 aa8.79□□□□□ -1
VCAN-212ENST00000515397 IL34Q6ZMJ4 242 aa8.79□□□□□ -1
VCAN-212ENST00000515397 TBC1D26Q86UD7 250 aa8.79□□□□□ -1
VCAN-212ENST00000515397 USMG5Q96IX5 58 aa8.79□□□□□ -1
VCAN-212ENST00000515397 OR4C12Q96R67 309 aa8.79□□□□□ -1
VCAN-212ENST00000515397 HINT2Q9BX68 163 aa8.79□□□□□ -1
VCAN-212ENST00000515397 ZC4H2Q9NQZ6 224 aa8.79□□□□□ -1
VCAN-212ENST00000515397 BET1LQ9NYM9 111 aa8.79□□□□□ -1
VCAN-212ENST00000515397 LSM4Q9Y4Z0 139 aaKnown RBP8.79□□□□□ -1
VCAN-212ENST00000515397 DNAH9Q9NYC9 4486 aa8.79□□□□□ -1
VCAN-212ENST00000515397 COL7A1Q02388 2944 aa8.79□□□□□ -1
VCAN-212ENST00000515397 IGHV3-21A0A0B4J1V1 117 aa8.78□□□□□ -1
VCAN-212ENST00000515397 TEX50A0A1B0GTY4 177 aa8.78□□□□□ -1
VCAN-212ENST00000515397 OR2C1O95371 312 aa8.78□□□□□ -1
VCAN-212ENST00000515397 BRI3O95415 125 aa8.78□□□□□ -1
VCAN-212ENST00000515397 DEFA4P12838 97 aa8.78□□□□□ -1
VCAN-212ENST00000515397 PGAM2P15259 253 aa8.78□□□□□ -1
VCAN-212ENST00000515397 EDN2P20800 178 aa8.78□□□□□ -1
VCAN-212ENST00000515397 ZP3P21754 424 aa8.78□□□□□ -1
VCAN-212ENST00000515397 PSMB6P28072 239 aa8.78□□□□□ -1
VCAN-212ENST00000515397 MAS1LP35410 378 aa8.78□□□□□ -1
VCAN-212ENST00000515397 RPL5P46777 297 aaKnown RBP8.78□□□□□ -1
VCAN-212ENST00000515397 INSL3P51460 131 aa8.78□□□□□ -1
VCAN-212ENST00000515397 IZUMO4Q1ZYL8 232 aa8.78□□□□□ -1
VCAN-212ENST00000515397 RPEL1Q2QD12 228 aa8.78□□□□□ -1
VCAN-212ENST00000515397 FAAP20Q6NZ36 180 aa8.78□□□□□ -1
VCAN-212ENST00000515397 CMTM1Q8IZ96 169 aa8.78□□□□□ -1
VCAN-212ENST00000515397 DYNC2LI1Q8TCX1 351 aa8.78□□□□□ -1
VCAN-212ENST00000515397 PLEKHA2Q9HB19 425 aa8.78□□□□□ -1
VCAN-212ENST00000515397 ZMAT5Q9UDW3 170 aaKnown RBP8.78□□□□□ -1
VCAN-212ENST00000515397 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 DBX1A6NMT0 343 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 MARCH11A6NNE9 402 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 NPIPB5A8MRT5 1133 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 IGKV1-39P01597 117 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 IGKV1D-39P04432 117 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 IFNA6P05013 189 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 CTRB1P17538 263 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 ERVK-16P61578 105 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 POU2AF1Q16633 256 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 SCGB2B2Q4G0G5 96 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 RNASE10Q5GAN6 216 aaKnown RBP8.77□□□□□ -1.01
VCAN-212ENST00000515397 VAX1Q5SQQ9 334 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 CTRB2Q6GPI1 263 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 CLEC19AQ6UXS0 136 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 SLC25A42Q86VD7 318 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 NECAP1Q8NC96 275 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 OR9G4Q8NGQ1 327 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 OR4A5Q8NH83 315 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 CD300LFQ8TDQ1 290 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 DIRAS2Q96HU8 199 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 AIFM2Q9BRQ8 373 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 ELOVL1Q9BW60 279 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 COMMD5Q9GZQ3 224 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 C6orf62Q9GZU0 229 aaPredicted RBP8.77□□□□□ -1.01
VCAN-212ENST00000515397 MTFP1Q9UDX5 166 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 ZNF257Q9Y2Q1 563 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 DMRT1Q9Y5R6 373 aa8.77□□□□□ -1.01
VCAN-212ENST00000515397 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.76□□□□□ -1.01
VCAN-212ENST00000515397 IGHV3-35A0A0C4DH35 117 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 MFSD2BA6NFX1 497 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 FAM223BA6NKX1 122 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 H3BMQ9 156 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 CRYGCP07315 174 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 CSN3P07498 182 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 OR13C7P0DN81 318 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 GP9P14770 177 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 PPP5CP53041 499 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 TMBIM6P55061 237 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 FAM223AQ8IWN6 122 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 RAB2BQ8WUD1 216 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 BORCS5Q969J3 196 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 ISOC1Q96CN7 298 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 B9D2Q9BPU9 175 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 COMMD9Q9P000 198 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 OR51B2Q9Y5P1 312 aa8.76□□□□□ -1.01
VCAN-212ENST00000515397 IZUMO1RA6ND01 250 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 RAB3DO95716 219 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 IGLV1-51P01701 117 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 TRAPPC2P0DI81 140 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 TRAPPC2BP0DI82 140 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 UCP3P55916 312 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 WT1-ASQ06250 92 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 IL18Q14116 193 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 TATDN3Q17R31 274 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 SP6Q3SY56 376 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 SPINK9Q5DT21 86 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 SLC25A24Q6NUK1 477 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 LPCAT3Q6P1A2 487 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 ADAMTSL5Q6ZMM2 481 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 SLC38A6Q8IZM9 456 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 OR6Q1Q8NGQ2 317 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 OR1L8Q8NGR8 309 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 MRGPRFQ96AM1 343 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 CCDC140Q96MF4 163 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms