RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GAPDHP04406 335 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 HSPB1P04792 205 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 PFN1P07737 140 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 SLC23A3Q6PIS1 610 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 C1QL2Q7Z5L3 287 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 DTWD2Q8NBA8 298 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 OR10P1Q8NGE3 313 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 LSM5Q9Y4Y9 91 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 TNFSF11O14788 317 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 MPIG6BO95866 241 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 RHOBP62745 196 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 GGNQ86UU5 652 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 Q8N976 141 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 MRAPQ8TCY5 172 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 SPCS1Q9Y6A9 102 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 ZFHX4Q86UP3 3567 aa6.28□□□□□ -1.4
PDLIM5-219ENST00000514743 BORCS7-ASMTA0A0B4J1R7 106 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 A0A1W2PRX2 142 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 MLNRO43193 412 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 TUSC2O75896 110 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 SERF1AO75920 110 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 TMEM50AO95807 157 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 SEC11BP0C7V7 166 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 HIST1H1DP16402 221 aaKnown RBP6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 RPS18P62269 152 aaKnown RBP6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 IL13RA2Q14627 380 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 ICAM4Q14773 271 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 FOXI2Q6ZQN5 318 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 PPP1R32Q7Z5V6 425 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 RPS19BP1Q86WX3 136 aaKnown RBP6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 PLPPR1Q8TBJ4 325 aa6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 WDR61Q9GZS3 305 aaKnown RBP6.27□□□□□ -1.4
PDLIM5-219ENST00000514743 TECTAO75443 2155 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 NSG1A0A0A6YYJ2 146 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 H3BUT2 72 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 K7EN84 100 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 SDCBPO00560 298 aaPredicted RBP6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 GPR137BO60478 399 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF253O75346 499 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 FCGR2CP31995 323 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 CCL20P78556 96 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 STUMQ69YW2 141 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 HOGA1Q86XE5 327 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 BAGE3Q86Y29 109 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 BAGE2Q86Y30 109 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 OR2T10Q8NGZ9 312 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 LHX4Q969G2 390 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 JMJD8Q96S16 334 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 RAB9BQ9NP90 201 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 ASPMQ8IZT6 3477 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 LRRC3CA6NJW4 275 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 CEACAM18A8MTB9 384 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 DHHO43323 396 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 DHRS3O75911 302 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 RFPL3SP0C7P2 107 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 HIST1H1EP10412 219 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 CRYGSP22914 178 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 FOLR3P41439 243 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 EIF3IQ13347 325 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 KISS1Q15726 138 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 ADAMTSL5Q6ZMM2 481 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 GJC3Q8NFK1 279 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 ST6GALNAC6Q969X2 333 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 TMEM230Q96A57 120 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 ARHGAP5-AS1Q96IT6 56 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 TMEM59Q9BXS4 323 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 ST20Q9HBF5 79 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 RNF114Q9Y508 228 aa6.27□□□□□ -1.41
PDLIM5-219ENST00000514743 CENPVL3A0A0U1RRI6 287 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 DPRXA6NFQ7 191 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 FAM90A27PA6NNH2 459 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 OR7C1O76099 320 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 THBS3P49746 956 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 TCTAP57738 103 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 LRRC75BQ2VPJ9 315 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 FAM162BQ5T6X4 162 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 RNF152Q8N8N0 203 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 OR51G1Q8NGK1 321 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 OR10AG1Q8NH19 301 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 OR4A16Q8NH70 328 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 KIR2DL5BQ8NHK3 375 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 RTN4IP1Q8WWV3 396 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 NAT8BQ9UHF3 227 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 ANXA10Q9UJ72 324 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 RCL1Q9Y2P8 373 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 TNRC6AQ8NDV7 1962 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 LRP5LA4QPB2 252 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 ISLRO14498 428 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 MT-ATP8P03928 68 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 CELA3BP08861 270 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 RPL12P30050 165 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 ZXDAP98168 799 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 RPEL1Q2QD12 228 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 KRTAP27-1Q3LI81 207 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 VAX1Q5SQQ9 334 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 TMEM105Q8N8V8 129 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 OR10D3Q8NH80 312 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 C8orf46Q8TAG6 207 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms