RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 CDX4O14627 284 aaPredicted RBP11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 TOX4O94842 621 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 KLF14Q8TD94 323 aaPredicted RBP11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 ZNF703Q9H7S9 590 aaPredicted RBP11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 STPG3Q8N7X2 389 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 OR4S2Q8NH73 311 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 RNF138Q8WVD3 245 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 TMEM140Q9NV12 185 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 TCF19Q9Y242 345 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 TBL2Q9Y4P3 447 aaKnown RBP11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 M0R2Z0 102 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 MPDU1O75352 247 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 PRDX2P32119 198 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 MFAP2P55001 183 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 CENPWQ5EE01 88 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 STUMQ69YW2 141 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 GTF3C1Q12789 2109 aa11.62□□□□□ -0.55
TSPAN17-208ENST00000514705 ENSAO43768 121 aaKnown RBP11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 LHX2P50458 406 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 RAB7AP51149 207 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 Q0VFX4 171 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 PSG7Q13046 419 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 MIEN1Q9BRT3 115 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 RAB9BQ9NP90 201 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 IL19Q9UHD0 177 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 VSTM5A8MXK1 200 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 GATA2P23769 480 aaPredicted RBP11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 MRPS11P82912 194 aaKnown RBP11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 TIPARPQ7Z3E1 657 aaKnown RBP11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 ZNF114Q8NC26 417 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 OR4C5Q8NGB2 326 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 TECRQ9NZ01 308 aaKnown RBP11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 IL36BQ9NZH7 164 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 COX7A2P2O60397 106 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 COLCA1Q6ZS62 124 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 BLNKQ8WV28 456 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 TMEM167BQ9NRX6 74 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 APOA2P02652 100 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 APCSP02743 223 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 ADH4P08319 380 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 IL6RP08887 468 aaPredicted RBP11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 CHRNB4P30926 498 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 CLDN18P56856 261 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 Q6P435 159 aa11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 RNASE7Q9H1E1 156 aaKnown RBP11.61□□□□□ -0.55
TSPAN17-208ENST00000514705 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 BET1LQ9NYM9 111 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 ELOVL5Q9NYP7 299 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 WDR83OSQ9Y284 106 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 ZNF83P51522 516 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 NRN1LQ496H8 165 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 IBA57Q5T440 356 aaKnown RBP11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 ETFRF1Q6IPR1 90 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 CBY3A6NI87 242 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 M0R1B8 84 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 MPV17P39210 176 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 RND1Q92730 232 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 VPS25Q9BRG1 176 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 TMEM208Q9BTX3 173 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 COL25A1Q9BXS0 654 aaPredicted RBP11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 DNAJC4Q9NNZ3 241 aa11.6□□□□□ -0.55
TSPAN17-208ENST00000514705 C9orf172C9J069 976 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 J3QR06 171 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 TIMP3P35625 211 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 MMDQ15546 238 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 PEAR1Q5VY43 1037 aaPredicted RBP11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 SPATA31B1PQ5VZV4 182 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 Q6ZSR3 168 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 DKK1O94907 266 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 SP1P08047 785 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 TDGF1P3P51864 188 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 GFRA1P56159 465 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 RTL8BQ17RB0 113 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 MOGAT3Q86VF5 341 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 TXNDC17Q9BRA2 123 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 LINC00473A8K010 186 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 RBFOX2O43251 390 aaKnown RBP eCLIP11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 SMPD2O60906 423 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 PLAUP00749 431 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 IGFBP2P18065 325 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 PRR31Q5SQ13 230 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 ZNRF1Q8ND25 227 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 FAM122AQ96E09 287 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 TRGV10A0A0A0MS01 117 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 TMEM210A6NLX4 147 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 LMO1P25800 156 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 ERHP84090 104 aaKnown RBP11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 C22orf15Q8WYQ4 148 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 UQCR10Q9UDW1 63 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 BDP1A6H8Y1 2624 aa11.59□□□□□ -0.55
TSPAN17-208ENST00000514705 DLEU1O43261 78 aa11.58□□□□□ -0.56
TSPAN17-208ENST00000514705 NUPR1O60356 82 aa11.58□□□□□ -0.56
TSPAN17-208ENST00000514705 ATP1A1-AS1Q5TC04 95 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms