RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ARFRP1Q13795 201 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 RBMY1FQ15415 496 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 SMN1Q16637 294 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 IGSF11Q5DX21 431 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 SOHLH1Q5JUK2 328 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 FAM89BQ8N5H3 189 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 OR6M1Q8NGM8 313 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 TMEM167AQ8TBQ9 72 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 CMSS1Q9BQ75 279 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 DCUN1D5Q9BTE7 237 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 DIMT1Q9UNQ2 313 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 RBM7Q9Y580 266 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 PNMA8CA0A1B0GUJ8 204 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 C15orf61A6NNL5 157 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 C16orf90A8MZG2 172 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 TGOLN2O43493 480 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 MRPS14O60783 128 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 FCGR3BO75015 233 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 WBP4O75554 376 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 BPNT1O95861 308 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 REG1AP05451 166 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 CELP19835 753 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 PTBP1P26599 531 aaKnown RBP eCLIP6.5□□□□□ -1.37
CAST-239ENST00000513666 TMEM50BP56557 158 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 TAS2R43P59537 309 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 SSX9Q7RTT3 188 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 LRRTM1Q86UE6 522 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 VKORC1L1Q8N0U8 176 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 PUSL1Q8N0Z8 303 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 CENPSQ8N2Z9 138 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 VSTM2AQ8TAG5 236 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 ARHGAP5-AS1Q96IT6 56 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 OR2A7Q96R45 310 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 URM1Q9BTM9 101 aaKnown RBP6.5□□□□□ -1.37
CAST-239ENST00000513666 NDUFAF3Q9BU61 184 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 PECRQ9BY49 303 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 ETV7Q9Y603 341 aa6.5□□□□□ -1.37
CAST-239ENST00000513666 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 DEFB131BA0A096LNP1 70 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 IRGMA1A4Y4 181 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 K7EMT4 169 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 NDUFA4O00483 81 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 ATP8B1O43520 1251 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 CD1AP06126 327 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 MIFP14174 115 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 C1orf146Q5VVC0 180 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 CHRDL1Q9BU40 450 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 C20orf24Q9BUV8 137 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 MRPS7Q9Y2R9 242 aaKnown RBP6.49□□□□□ -1.37
CAST-239ENST00000513666 PRELID3BQ9Y3B1 194 aa6.49□□□□□ -1.37
CAST-239ENST00000513666 APOBP04114 4563 aaKnown RBP6.48□□□□□ -1.37
CAST-239ENST00000513666 IGLV2-18A0A075B6J9 118 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 LOC100130705A0A1B0GUX0 176 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 ZNF207O43670 478 aaKnown RBP6.48□□□□□ -1.37
CAST-239ENST00000513666 CD74P04233 296 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 CD37P11049 281 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 CALRP27797 417 aaKnown RBP6.48□□□□□ -1.37
CAST-239ENST00000513666 TFPI2P48307 235 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 PLAC9Q5JTB6 97 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 Q6ZRM9 215 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 KCTD9Q7L273 389 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 H1FOOQ8IZA3 346 aaPredicted RBP6.48□□□□□ -1.37
CAST-239ENST00000513666 CBR4Q8N4T8 237 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 VN1R17PQ8TDU5 208 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 PHYHIPQ92561 330 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 BSCL2Q96G97 398 aaPredicted RBP6.48□□□□□ -1.37
CAST-239ENST00000513666 RNF2Q99496 336 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 SCRT2Q9NQ03 307 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 THYN1Q9P016 225 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 SMPXQ9UHP9 88 aa6.48□□□□□ -1.37
CAST-239ENST00000513666 IGHV3OR16-8A0A075B7F1 116 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 OR2T8A6NH00 312 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 CGB1A6NKQ9 187 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 C15orf62A8K5M9 175 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 ZNF705EA8MWA4 302 aaPredicted RBP6.47□□□□□ -1.37
CAST-239ENST00000513666 IFNA10P01566 189 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 CDK1P06493 297 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 FCGR3AP08637 254 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 RPL8P62917 257 aaKnown RBP6.47□□□□□ -1.37
CAST-239ENST00000513666 INSL4Q14641 139 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 SSX1Q16384 188 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 OR2B11Q5JQS5 317 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 RBM48Q5RL73 367 aaKnown RBP6.47□□□□□ -1.37
CAST-239ENST00000513666 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 SPSB3Q6PJ21 355 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 OR4S2Q8NH73 311 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 TMEM80Q96HE8 168 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 GINS4Q9BRT9 223 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 U3KQE9 123 aa6.47□□□□□ -1.37
CAST-239ENST00000513666 CHEK1O14757 476 aa6.46□□□□□ -1.37
CAST-239ENST00000513666 IFNA21P01568 189 aa6.46□□□□□ -1.37
CAST-239ENST00000513666 IFNA17P01571 189 aa6.46□□□□□ -1.37
CAST-239ENST00000513666 HLA-GP17693 338 aa6.46□□□□□ -1.37
CAST-239ENST00000513666 CRHBPP24387 322 aa6.46□□□□□ -1.37
CAST-239ENST00000513666 OR2B8PP59922 312 aa6.46□□□□□ -1.37
CAST-239ENST00000513666 RPL30P62888 115 aaKnown RBP6.46□□□□□ -1.37
CAST-239ENST00000513666 MRPS15P82914 257 aaKnown RBP6.46□□□□□ -1.37
CAST-239ENST00000513666 P2RY14Q15391 338 aa6.46□□□□□ -1.37
CAST-239ENST00000513666 C12orf74Q32Q52 190 aa6.46□□□□□ -1.37
CAST-239ENST00000513666 ACSM3Q53FZ2 586 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms