RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	TIMM50	Q3ZCQ8	353 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	BORCS5	Q969J3	196 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	ISOC1	Q96CN7	298 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	S100A16	Q96FQ6	103 aa	Known RBP	9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	CXorf58	Q96LI9	332 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	CCDC140	Q96MF4	163 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	GPHA2	Q96T91	129 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	SLC5A7	Q9GZV3	580 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	PLEKHA2	Q9HB19	425 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	SLC2A8	Q9NY64	477 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098	ANAPC10	Q9UM13	185 aa		9.47	□□□□□ -0.89
UBE2D3-231	ENST00000513098		A8MWP6	167 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	SULT1C2	O00338	296 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	UPK2	O00526	184 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TNFSF12	O43508	249 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	NAT1	P18440	290 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CBLN1	P23435	193 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CATR1	Q13166	79 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	NEDD8	Q15843	81 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	FAM106A	Q4KMX7	169 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	ZNF818P	Q6ZRF7	136 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	SSX9	Q7RTT3	188 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	EEF1AKMT3	Q96AZ1	226 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	NEURL2	Q9BR09	285 aa		9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	PLEC	Q15149	4684 aa	Known RBP	9.46	□□□□□ -0.9
UBE2D3-231	ENST00000513098	IGLC7	A0M8Q6	106 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TPPP	O94811	219 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	HLA-A	P01891	365 aa	Known RBP	9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CLEC3B	P05452	202 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	C8orf88	P0DMB2	117 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	PTBP1	P26599	531 aa	Known RBP eCLIP	9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	ARL3	P36405	182 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CD81	P60033	236 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	THOC7	Q6I9Y2	204 aa	Known RBP	9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CLEC19A	Q6UXS0	136 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	C19orf35	Q6ZS72	473 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	HIPK2	Q9H2X6	1198 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	HRASLS	Q9HDD0	168 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	PALMD	Q9NP74	551 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	COMMD9	Q9P000	198 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CEPT1	Q9Y6K0	416 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	HYDIN	Q4G0P3	5121 aa		9.45	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TRAV3	A0A0B4J244	114 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	LCE6A	A0A183	80 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TMEM213	A2RRL7	107 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	RBMY1B	A6NDE4	496 aa	Known RBP	9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	RBMY1E	A6NEQ0	496 aa	Known RBP	9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CD7	P09564	240 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	RBMY1D	P0C7P1	496 aa	Known RBP	9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	DEFA4	P12838	97 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	MYOD1	P15172	320 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	RPS19	P39019	145 aa	Known RBP	9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	ELL	P55199	621 aa	Predicted RBP	9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	UBE2NL	Q5JXB2	153 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	DYNLRB2	Q8TF09	96 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	MOB3A	Q96BX8	217 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	YIPF6	Q96EC8	236 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	ATP6V0B	Q99437	205 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	COMMD5	Q9GZQ3	224 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	THYN1	Q9P016	225 aa		9.44	□□□□□ -0.9
UBE2D3-231	ENST00000513098	OR11H12	B2RN74	326 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	PGLYRP1	O75594	196 aa	Predicted RBP	9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	F2R	P25116	425 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	RFX2	P48378	723 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	FXYD4	P59646	89 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	LYSMD2	Q8IV50	215 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	IL17D	Q8TAD2	202 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	ZNF502	Q8TBZ5	544 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	VN1R17P	Q8TDU5	208 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	MARC2	Q969Z3	335 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CMTM3	Q96MX0	182 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	QTRT1	Q9BXR0	403 aa	Known RBP	9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	PLEKHA3	Q9HB20	300 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	NDUFA4L2	Q9NRX3	87 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	FAM212B	Q9NTI7	297 aa	Predicted RBP	9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TMEM140	Q9NV12	185 aa		9.43	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TRAV25	A0A0B4J276	109 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TEX50	A0A1B0GTY4	177 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	MFSD2B	A6NFX1	497 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	CYB5B	O43169	146 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	IGHV3-23	P01764	117 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	REG1A	P05451	166 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	SERPINE2	P07093	398 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	EDN2	P20800	178 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TAS2R46	P59540	309 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	HERV-K104	P61576	105 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	ANKRD55	Q3KP44	614 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	TMEM69	Q5SWH9	247 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	AADACL3	Q5VUY0	350 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	ZNF57	Q68EA5	555 aa	Predicted RBP	9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	DEFB125	Q8N687	156 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	GDPD1	Q8N9F7	314 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	UXS1	Q8NBZ7	420 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	OR1L8	Q8NGR8	309 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	WDR89	Q96FK6	387 aa	Predicted RBP	9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	ZNF436	Q9C0F3	470 aa	Predicted RBP	9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	IFT46	Q9NQC8	304 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	EHF	Q9NZC4	300 aa		9.42	□□□□□ -0.9
UBE2D3-231	ENST00000513098	MRPL27	Q9P0M9	148 aa	Known RBP	9.42	□□□□□ -0.9

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