RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ATG2AQ2TAZ0 1938 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 MYO16Q9Y6X6 1858 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 IGHV3OR16-12A0A075B7B8 117 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 C5orf49A4QMS7 147 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 MRPS14O60783 128 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 IGLC6P0CF74 106 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 GATA2P23769 480 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 BRS3P32247 399 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 CRYBA2P53672 197 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 PYY3Q5JQD4 70 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 STPG1Q5TH74 334 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 NCBP2-AS2Q69YL0 99 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 PRSS54Q6PEW0 395 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 TCTEX1D1Q8N7M0 179 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 OR2G3Q8NGZ4 309 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 VN1R17PQ8TDU5 208 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 IL36RNQ9UBH0 155 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 AMMECR1Q9Y4X0 333 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 KIAA1671Q9BY89 1806 aa4.83□□□□□ -1.64
TRAPPC11-209ENST00000512476 FAM72CH0Y354 149 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 ERGP11308 486 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 CDKN2AP42771 156 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 SLC10A2Q12908 348 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 Q499Y3 187 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 FAM72AQ5TYM5 149 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 FAM72DQ6L9T8 149 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 LRRTM1Q86UE6 522 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 FAM72BQ86X60 149 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 H1FOOQ8IZA3 346 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 KLK15Q9H2R5 256 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 KMT2EQ8IZD2 1858 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 TRAV30A0A087WSZ9 112 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 J3QQQ9 107 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 AGPAT2O15120 278 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 GADD45AP24522 165 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 RPL22P35268 128 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 POLR2IP36954 125 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 SLC25A1P53007 311 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 DAD1P61803 113 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 ERCC8Q13216 396 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 NRF1Q16656 503 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 MUC21Q5SSG8 566 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 HES3Q5TGS1 186 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 LYRM7Q5U5X0 104 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 TMEM244Q5VVB8 128 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 GLT8D1Q68CQ7 371 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 SCGB1D4Q6XE38 83 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 Q6ZRP5 223 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 TCF23Q7RTU1 214 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 TCTE3Q8IZS6 198 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 ZNRF4Q8WWF5 429 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 NEURL3Q96EH8 262 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 NOX3Q9HBY0 568 aa4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 ZNF629Q9UEG4 869 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 ZNF706Q9Y5V0 76 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-209ENST00000512476 GREB1Q4ZG55 1949 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 TRGV8A0A0C4DH27 118 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 K7ESM1 405 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 ADRA2AP08913 450 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 TDGF1P13385 188 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 IGHV1-2P23083 117 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 PPP1CCP36873 323 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 LPAR6P43657 344 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 HERVK_113P63121 156 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 CDK6Q00534 326 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 PSG9Q00887 426 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 Q6YL49 198 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 ZNF788Q6ZQV5 615 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 VN1R4Q7Z5H5 301 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 CTAGE3PQ8IX95 158 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 NAT14Q8WUY8 206 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 PSMG3Q9BT73 122 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 C11orf68Q9H3H3 251 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 POMPQ9Y244 141 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 RNF114Q9Y508 228 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 F11RQ9Y624 299 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 MIA3Q5JRA6 1907 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 LINC00862A6NCI5 91 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 CCDC179H3BU77 68 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 DNASE2O00115 360 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 RAMP2O60895 175 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 UPK1BO75841 260 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 SNAPC5O75971 98 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 IGLL1P15814 213 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 HMGA1P17096 107 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 THBS3P49746 956 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 BTG2P78543 158 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 TMEM69Q5SWH9 247 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 ARTNQ5T4W7 220 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 BCL2L15Q5TBC7 163 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 TMEM61Q8N0U2 210 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 PACRGLQ8N7B6 248 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 OR52P1PQ8NH57 321 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 OR2M4Q96R27 311 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 MGLLQ99685 303 aa4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 METTL1Q9UBP6 276 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 BOKQ9UMX3 212 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-209ENST00000512476 IGHV1-69DA0A0B4J2H0 117 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 GABARAPH6UMI1 98 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 ETV2O00321 342 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms