RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZP3P21754 424 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 OR2B8PP59922 312 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 ATP5G2Q06055 141 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 CD69Q07108 199 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 KLF5Q13887 457 aaPredicted RBP12.61□□□□□ -0.39
DDX41-213ENST00000512027 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 FAM223AQ8IWN6 122 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 CMTM1Q8IZ96 169 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 OR4A5Q8NH83 315 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 DYNC2LI1Q8TCX1 351 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 BORCS5Q969J3 196 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 DGCR14Q96DF8 476 aaKnown RBP12.61□□□□□ -0.39
DDX41-213ENST00000512027 FANCD2OSQ96PS1 177 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 OR4C12Q96R67 309 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 COMMD9Q9P000 198 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 ZNF257Q9Y2Q1 563 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 NSG2Q9Y328 171 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 PPP5D1E7EU14 171 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 NDUFB8O95169 186 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 KRASP01116 189 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 CTRB1P17538 263 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 PSMB6P28072 239 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 G6PCP35575 357 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 VAX1Q5SQQ9 334 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 CTRB2Q6GPI1 263 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 TBC1D26Q86UD7 250 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 SLC25A42Q86VD7 318 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 NECAP1Q8NC96 275 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 OR10W1Q8NGF6 305 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 OR4D10Q8NGI6 311 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 CD300LFQ8TDQ1 290 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 RAB2BQ8WUD1 216 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 B9D2Q9BPU9 175 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 FBXL7Q9UJT9 491 aa12.6□□□□□ -0.39
DDX41-213ENST00000512027 IGLC7A0M8Q6 106 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
DDX41-213ENST00000512027 CRYGCP07315 174 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 PI3P19957 117 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 PPP5CP53041 499 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 ERVK-16P61578 105 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 RNASE10Q5GAN6 216 aaKnown RBP12.59□□□□□ -0.39
DDX41-213ENST00000512027 IL34Q6ZMJ4 242 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 AIFM2Q9BRQ8 373 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 ELOVL1Q9BW60 279 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 COMMD5Q9GZQ3 224 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 MTFP1Q9UDX5 166 aa12.59□□□□□ -0.39
DDX41-213ENST00000512027 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.58□□□□□ -0.4
DDX41-213ENST00000512027 H3BMQ9 156 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 IGKV1-39P01597 117 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 IGKV1D-39P04432 117 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 GP9P14770 177 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 EDN2P20800 178 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 RPL5P46777 297 aaKnown RBP12.58□□□□□ -0.4
DDX41-213ENST00000512027 TMBIM6P55061 237 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 FAAP20Q6NZ36 180 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 OR9G4Q8NGQ1 327 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 OR6Q1Q8NGQ2 317 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 CCDC140Q96MF4 163 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 CCDC59Q9P031 241 aaKnown RBP12.58□□□□□ -0.4
DDX41-213ENST00000512027 DMRT1Q9Y5R6 373 aa12.58□□□□□ -0.4
DDX41-213ENST00000512027 TEX50A0A1B0GTY4 177 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 MFSD2BA6NFX1 497 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 DBX1A6NMT0 343 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 IGLV1-51P01701 117 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 IFNA6P05013 189 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 PGAM2P15259 253 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 LHFPL1Q86WI0 220 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 SLC38A6Q8IZM9 456 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 ISOC1Q96CN7 298 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 ASCL2Q99929 193 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 HINT2Q9BX68 163 aa12.57□□□□□ -0.4
DDX41-213ENST00000512027 QTRT1Q9BXR0 403 aaKnown RBP12.57□□□□□ -0.4
DDX41-213ENST00000512027 C6orf62Q9GZU0 229 aaPredicted RBP12.57□□□□□ -0.4
DDX41-213ENST00000512027 IGLV11-55A0A075B6I3 123 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 CSN3P07498 182 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 DEFA4P12838 97 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 UCP3P55916 312 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 WT1-ASQ06250 92 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 LPCAT3Q6P1A2 487 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 CLEC19AQ6UXS0 136 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 DIRAS2Q96HU8 199 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 ZC4H2Q9NQZ6 224 aa12.56□□□□□ -0.4
DDX41-213ENST00000512027 GABARAPH6UMI1 98 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 NOL3O60936 208 aaKnown RBP12.55□□□□□ -0.4
DDX41-213ENST00000512027 OR2C1O95371 312 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 CD74P04233 296 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 TRAPPC2P0DI81 140 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 TRAPPC2BP0DI82 140 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 DCTN2Q13561 401 aaKnown RBP12.55□□□□□ -0.4
DDX41-213ENST00000512027 IL18Q14116 193 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 SCGB2B2Q4G0G5 96 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 ARRDC1Q8N5I2 433 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 TMEM229BQ8NBD8 167 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 MRGPRFQ96AM1 343 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 SEC22AQ96IW7 307 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 BCL7BQ9BQE9 202 aa12.55□□□□□ -0.4
DDX41-213ENST00000512027 SLIRPQ9GZT3 109 aaKnown RBP12.55□□□□□ -0.4
DDX41-213ENST00000512027 OR51B2Q9Y5P1 312 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms