RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 DMRTC1Q5HYR2 192 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 LCN8Q6JVE9 175 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 SFXN4Q6P4A7 337 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 UNQ5815/PRO19632Q6UWF5 114 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 RNF175Q8N4F7 328 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 ZDHHC22Q8N966 263 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 WDR31Q8NA23 367 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 OR4K17Q8NGC6 315 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 OR1L3Q8NH93 324 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 ATP6V0E2Q8NHE4 81 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 JOSD2Q8TAC2 188 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 TWIST2Q8WVJ9 160 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 CRYGNQ8WXF5 182 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 MUCL1Q96DR8 90 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 TMEM101Q96IK0 257 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 PITX2Q99697 317 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 KIR2DL4Q99706 377 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 TBL1YQ9BQ87 522 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 SNRNP25Q9BV90 132 aaKnown RBP4.12□□□□□ -1.75
NUP54-210ENST00000510884 CHST6Q9GZX3 395 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 TMEM191AQ9H0A3 160 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 PARLQ9H300 379 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 AIG1Q9NVV5 245 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 HRASLS2Q9NWW9 162 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 TXNL4BQ9NX01 149 aaKnown RBP4.12□□□□□ -1.75
NUP54-210ENST00000510884 SLC2A6Q9UGQ3 507 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 TMED7Q9Y3B3 224 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 HEBP2Q9Y5Z4 205 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 C5orf42Q9H799 3197 aa4.12□□□□□ -1.75
NUP54-210ENST00000510884 TUBGCP6Q96RT7 1819 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 CACNA1SQ13698 1873 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 CFAP54Q96N23 3096 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 TRBV24-1A0A075B6N3 115 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 TRAV18A0A075B6X5 111 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 SMIM28A0A1B0GU29 152 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 LOC100130705A0A1B0GUX0 176 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ZNF850A8MQ14 1090 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 F8VVB4 439 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 F8VWA3 439 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 G3V2L1 256 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 H0YL77 283 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 XRCC3O43542 346 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 CREBL2O60519 120 aaPredicted RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 DPM2O94777 84 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 CYB5AP00167 134 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 CA2P00918 260 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 IGF1P05019 195 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 KRTAP1-4P0C5Y4 121 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 PPIBP23284 216 aaKnown RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 SRP14P37108 136 aaKnown RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 RPS14P62263 151 aaKnown RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 ENDOGQ14249 297 aaKnown RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 ATXN7L3Q14CW9 347 aaPredicted RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 SPHARQ15513 63 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 MMDQ15546 238 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 PMCHL1Q16048 86 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ZNF74Q16587 644 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 GSG1Q2KHT4 349 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 SPATA31B1PQ5VZV4 182 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ZNF57Q68EA5 555 aaPredicted RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 MORN3Q6PF18 240 aaPredicted RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 RASL11AQ6T310 242 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 Q6ZR54 194 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 Q6ZS92 163 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 Q6ZSR3 168 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 SLC25A48Q6ZT89 311 aaKnown RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 COMMD6Q7Z4G1 85 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 VKORC1L1Q8N0U8 176 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 TMEM86AQ8N2M4 240 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 OR11H6Q8NGC7 330 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 PHLDA1Q8WV24 401 aaPredicted RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 BADQ92934 168 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 MS4A6EQ96DS6 147 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ZNF414Q96IQ9 312 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ZNF681Q96N22 645 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 RARRES2Q99969 163 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ADAT1Q9BUB4 502 aaKnown RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 PBOV1Q9GZY1 135 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 FBXL15Q9H469 300 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 FGF20Q9NP95 211 aaPredicted RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 SIGLEC8Q9NYZ4 499 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 RABAC1Q9UI14 185 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 FZR1Q9UM11 496 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ZNF443Q9Y2A4 671 aaPredicted RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 NSG2Q9Y328 171 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 MED31Q9Y3C7 131 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ECM29Q5VYK3 1845 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ZNF106Q9H2Y7 1883 aaKnown RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 MYH8P13535 1937 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 PLXND1Q9Y4D7 1925 aa4.11□□□□□ -1.75
NUP54-210ENST00000510884 ASH1LQ9NR48 2969 aaKnown RBP4.11□□□□□ -1.75
NUP54-210ENST00000510884 PIK3C2AO00443 1686 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 MUC6Q6W4X9 2439 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 CEP290O15078 2479 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 SPAARA0A1B0GVQ0 90 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 A0A1B0GW64 132 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 ZNF670-ZNF695F2Z2N8 137 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 F8W1H4 67 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 PIRO00625 290 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 NPFFO15130 113 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms