RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 GRPEL2Q8TAA5 225 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 CNIH3Q8TBE1 160 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 CD300LFQ8TDQ1 290 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 MROQ9BYG7 248 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 FNDC4Q9H6D8 234 aaPredicted RBP4.09□□□□□ -1.75
USP53-206ENST00000510737 ADGRL4Q9HBW9 690 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 METTL1Q9UBP6 276 aaKnown RBP4.09□□□□□ -1.75
USP53-206ENST00000510737 LAMP5Q9UJQ1 280 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 OR52A1Q9UKL2 312 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 ZNF320A2RRD8 509 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 TGOLN2O43493 480 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 ORC5O43913 435 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 ZNF254O75437 659 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 KBTBD11O94819 623 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 GADD45GO95257 159 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 FADS2O95864 444 aaKnown RBP4.08□□□□□ -1.76
USP53-206ENST00000510737 SERPINA3P01011 423 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 PRH1P02810 166 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 PJVKQ0ZLH3 352 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 TNFAIP8L3Q5GJ75 292 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 SAMD4BQ5PRF9 694 aaKnown RBP4.08□□□□□ -1.76
USP53-206ENST00000510737 RPL13AP3Q6NVV1 102 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 ASCL4Q6XD76 172 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 PLEKHG7Q6ZR37 379 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 ZNF833PQ6ZTB9 187 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 OR5D18Q8NGL1 313 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 THRSPQ92748 146 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 GHSRQ92847 366 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 DNAH8Q96JB1 4490 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 SPAG8Q99932 426 aaPredicted RBP4.08□□□□□ -1.76
USP53-206ENST00000510737 APOL4Q9BPW4 351 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 TMEM109Q9BVC6 243 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 TTTY10Q9BZA0 68 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 CHST5Q9GZS9 411 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 CMC2Q9NRP2 79 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 CMTM6Q9NX76 183 aa4.08□□□□□ -1.76
USP53-206ENST00000510737 RIIAD1A6NNX1 92 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 SYT7O43581 403 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 GGCTO75223 188 aaKnown RBP4.07□□□□□ -1.76
USP53-206ENST00000510737 GATBO75879 557 aaKnown RBP4.07□□□□□ -1.76
USP53-206ENST00000510737 IFNGP01579 166 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 MT-ND4P03905 459 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 APELAP0DMC3 54 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 CT45A6P0DMU7 189 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 CT45A5P0DMU8 189 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 CT45A7P0DMV0 189 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 ATF1P18846 271 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 FCGR2CP31995 323 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 IFNGR2P38484 337 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 MAGEA2P43356 314 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 LGALS7P47929 136 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 HAMPP81172 84 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 RHOGP84095 191 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 ATP5G2Q06055 141 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 MED21Q13503 144 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 EXOSC2Q13868 293 aaKnown RBP4.07□□□□□ -1.76
USP53-206ENST00000510737 ZNF829Q3KNS6 432 aaPredicted RBP4.07□□□□□ -1.76
USP53-206ENST00000510737 MORN2Q502X0 79 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 BCL2L15Q5TBC7 163 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 RASSF6Q6ZTQ3 369 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 SUMF2Q8NBJ7 301 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 OR2T33Q8NG76 320 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 ZNRF2Q8NHG8 242 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 ADAT3Q96EY9 351 aaPredicted RBP4.07□□□□□ -1.76
USP53-206ENST00000510737 C5orf66Q9H5L9 145 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 RHOFQ9HBH0 211 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 ARMC1Q9NVT9 282 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 COA4Q9NYJ1 87 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 GNG12Q9UBI6 72 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 BAIAP2Q9UQB8 552 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 R4GMQ9 66 aa4.07□□□□□ -1.76
USP53-206ENST00000510737 TRBV9A0A0B4J1U6 114 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 A8MWP6 167 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 SLC22A1O15245 554 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 RGS16O15492 202 aaPredicted RBP4.06□□□□□ -1.76
USP53-206ENST00000510737 SOX14O95416 240 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 CA1P00915 261 aaPredicted RBP4.06□□□□□ -1.76
USP53-206ENST00000510737 NPPAP01160 153 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 MIFP14174 115 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 ZNF3P17036 446 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 ELK1P19419 428 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 ASIPP42127 132 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 KCNJ3P48549 501 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 CRISP1P54107 249 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 SMIM11AP58511 58 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 LIPEQ05469 1076 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 RIPK1Q13546 671 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 CGB2Q6NT52 195 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 UNQ9165/PRO28630Q6UXU0 137 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 SAXO1Q8IYX7 474 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 CENPSQ8N2Z9 138 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 BBS1Q8NFJ9 593 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 OR1L1Q8NH94 360 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 FAM46BQ96A09 425 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 MRPS24Q96EL2 167 aaKnown RBP4.06□□□□□ -1.76
USP53-206ENST00000510737 CNN2Q99439 309 aaKnown RBP4.06□□□□□ -1.76
USP53-206ENST00000510737 RNF5Q99942 180 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 YIPF3Q9GZM5 350 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 RNF167Q9H6Y7 350 aa4.06□□□□□ -1.76
USP53-206ENST00000510737 IKZF2Q9UKS7 526 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms