RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 OR4S2Q8NH73 311 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
RAB40C-202ENST00000509637 DCSTAMPQ9H295 470 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 ANXA10Q9UJ72 324 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 CXorf65A6NEN9 183 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 CREBL2O60519 120 aaPredicted RBP11.77□□□□□ -0.53
RAB40C-202ENST00000509637 DEDDO75618 318 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 FCER2P06734 321 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 CTXN2P0C2S0 81 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 CLEC2LP0C7M8 214 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 RPA2P15927 270 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 CD36P16671 472 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 TNFRSF9Q07011 255 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 DEFB135Q30KP9 77 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 ZNF367Q7RTV3 350 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 OR5H6Q8NGV6 325 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 ZNF436Q9C0F3 470 aaPredicted RBP11.77□□□□□ -0.53
RAB40C-202ENST00000509637 BET1LQ9NYM9 111 aa11.77□□□□□ -0.53
RAB40C-202ENST00000509637 MRPS7Q9Y2R9 242 aaKnown RBP11.77□□□□□ -0.53
RAB40C-202ENST00000509637 IGHV3OR16-8A0A075B7F1 116 aa11.76□□□□□ -0.53
RAB40C-202ENST00000509637 DPPA5A6NC42 116 aa11.76□□□□□ -0.53
RAB40C-202ENST00000509637 UPK2O00526 184 aa11.76□□□□□ -0.53
RAB40C-202ENST00000509637 SPRY2O43597 315 aa11.76□□□□□ -0.53
RAB40C-202ENST00000509637 ZNF124Q15973 351 aa11.76□□□□□ -0.53
RAB40C-202ENST00000509637 ZNF66Q6ZN08 573 aa11.76□□□□□ -0.53
RAB40C-202ENST00000509637 CHRDL1Q9BU40 450 aa11.76□□□□□ -0.53
RAB40C-202ENST00000509637 VPS13DQ5THJ4 4388 aa11.76□□□□□ -0.53
RAB40C-202ENST00000509637 TRBV7-1A0A0A6YYK4 115 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 IGHV3-21A0A0B4J1V1 117 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 TRAV25A0A0B4J276 109 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 SULT1C2O00338 296 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 MYL9P24844 172 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 ADMP35318 185 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 WT1-ASQ06250 92 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 POU2AF1Q16633 256 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 SPAG16Q8N0X2 631 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 OR2C3Q8N628 320 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 OR1L6Q8NGR2 347 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 VSTM2AQ8TAG5 236 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 LGALS14Q8TCE9 139 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 SECTM1Q8WVN6 248 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 SLC25A38Q96DW6 304 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 VCXQ9H320 206 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 RNF167Q9H6Y7 350 aa11.75□□□□□ -0.53
RAB40C-202ENST00000509637 TXNL4BQ9NX01 149 aaKnown RBP11.75□□□□□ -0.53
RAB40C-202ENST00000509637 MRPL27Q9P0M9 148 aaKnown RBP11.75□□□□□ -0.53
RAB40C-202ENST00000509637 NOTOA8MTQ0 251 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 SLC22A5O76082 557 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
RAB40C-202ENST00000509637 RPL35AP18077 110 aaKnown RBP11.74□□□□□ -0.53
RAB40C-202ENST00000509637 GALP22466 123 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.53
RAB40C-202ENST00000509637 FCGR2BP31994 310 aaPredicted RBP11.74□□□□□ -0.53
RAB40C-202ENST00000509637 FCGR2CP31995 323 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 Q6ZWC4 215 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 TMEM190Q8WZ59 177 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 RNF183Q96D59 192 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 C5orf66Q9H5L9 145 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 DAPK2Q9UIK4 370 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 TP53TG1Q9Y2A0 90 aa11.74□□□□□ -0.53
RAB40C-202ENST00000509637 TSPAN4O14817 238 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 TGOLN2O43493 480 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 ZNF207O43670 478 aaKnown RBP11.73□□□□□ -0.53
RAB40C-202ENST00000509637 HRASP01112 189 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 DEFA4P12838 97 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 ELLP55199 621 aaPredicted RBP11.73□□□□□ -0.53
RAB40C-202ENST00000509637 GNG2P59768 71 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 PLET1Q6UQ28 207 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 ZNF818PQ6ZRF7 136 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 OR13F1Q8NGS4 319 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 CNBD2Q96M20 576 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 CENPOQ9BU64 300 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 HRASLSQ9HDD0 168 aa11.73□□□□□ -0.53
RAB40C-202ENST00000509637 TEX50A0A1B0GTY4 177 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 OR2T8A6NH00 312 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 PPYP01298 95 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 FGF9P31371 208 aaPredicted RBP11.72□□□□□ -0.53
RAB40C-202ENST00000509637 BMI1P35226 326 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 RANBP1P43487 201 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 PRR20EP86478 221 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 PRR20CP86479 221 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 PRR20DP86480 221 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 PRR20BP86481 221 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 PRR20AP86496 221 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 RBPMS2Q6ZRY4 209 aaKnown RBP11.72□□□□□ -0.53
RAB40C-202ENST00000509637 HOGA1Q86XE5 327 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 BEST4Q8NFU0 473 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 OR4A5Q8NH83 315 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 MARC2Q969Z3 335 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 CXorf58Q96LI9 332 aa11.72□□□□□ -0.53
RAB40C-202ENST00000509637 RRP15Q9Y3B9 282 aaKnown RBP11.72□□□□□ -0.53
RAB40C-202ENST00000509637 TRAV18A0A075B6X5 111 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 DBX1A6NMT0 343 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 K7EIM0 57 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 RBFOX2O43251 390 aaKnown RBP eCLIP11.71□□□□□ -0.532e-11■■□□□ 12.3
RAB40C-202ENST00000509637 ARL6IP1Q15041 203 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 UBE2UQ5VVX9 321 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms