RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 FAM71E2Q8N5Q1 922 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 OR1L8Q8NGR8 309 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 THAP6Q8TBB0 222 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 PIFOQ8TCI5 191 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 CIB3Q96Q77 187 aaPredicted RBP8.29□□□□□ -1.08
RFC1-211ENST00000509084 RAB40CQ96S21 281 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 CLCC1Q96S66 551 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 RASL11BQ9BPW5 248 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 FBXL15Q9H469 300 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 HSPB7Q9UBY9 170 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 CCDC168Q8NDH2 2452 aa8.29□□□□□ -1.08
RFC1-211ENST00000509084 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 MDFIC2A0A1B0GVS7 189 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 A0A1W2PN81 502 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 K7EPK0 472 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 SYNGR2O43760 224 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 HLA-DRB1P01911 266 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 MBPP02686 304 aaPredicted RBP8.28□□□□□ -1.08
RFC1-211ENST00000509084 C1QBP02746 253 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 CNTFRP26992 372 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 CHRNA7P36544 502 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 F2RL1P55085 397 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 OR2B8PP59922 312 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 HSPE1P61604 102 aaKnown RBP8.28□□□□□ -1.08
RFC1-211ENST00000509084 LRRC37A5PQ49AS3 106 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 C11orf87Q6NUJ2 197 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 Q8N9W7 124 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 C22orf15Q8WYQ4 148 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 RITA1Q96K30 269 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 ZNF430Q9H8G1 570 aaPredicted RBP8.28□□□□□ -1.08
RFC1-211ENST00000509084 PLSCR3Q9NRY6 295 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 VPREB3Q9UKI3 123 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 NSG2Q9Y328 171 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 LSM5Q9Y4Y9 91 aaKnown RBP8.28□□□□□ -1.08
RFC1-211ENST00000509084 OR51B2Q9Y5P1 312 aa8.28□□□□□ -1.08
RFC1-211ENST00000509084 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 CEBPZOSA8MTT3 80 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 E5RGE8 158 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 L7N2F9 121 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 GPR137BO60478 399 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 DEDDO75618 318 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 SCAF4O95104 1147 aaKnown RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 CA2P00918 260 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 SLC25A4P12235 298 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 RPL27AP46776 148 aaKnown RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 HOXA1P49639 335 aaPredicted RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 COMPP49747 757 aaPredicted RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 TAS2R30P59541 319 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 POLR2GP62487 172 aaKnown RBP eCLIP8.27□□□□□ -1.09
RFC1-211ENST00000509084 VAMP2P63027 116 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 RPP30P78346 268 aaKnown RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 PRCDQ00LT1 54 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 TNXAQ16473 311 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 ZFP69Q49AA0 526 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 CXorf66Q5JRM2 361 aaPredicted RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 PRSS54Q6PEW0 395 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 HSD17B13Q7Z5P4 300 aaPredicted RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 C5orf56Q8N8D9 126 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 DTD1Q8TEA8 209 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 ZNF418Q8TF45 676 aaPredicted RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 HYLS1Q96M11 299 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 ZNF48Q96MX3 618 aaPredicted RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 SMR3AQ99954 134 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 SRSF8Q9BRL6 282 aaKnown RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 QTRT1Q9BXR0 403 aaKnown RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 PLEKHA3Q9HB20 300 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 ENY2Q9NPA8 101 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 TPSG1Q9NRR2 321 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 SOX21Q9Y651 276 aaPredicted RBP8.27□□□□□ -1.09
RFC1-211ENST00000509084 WSB1Q9Y6I7 421 aa8.27□□□□□ -1.09
RFC1-211ENST00000509084 TRAV14DV4A0A0A6YYC5 116 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 INS-IGF2F8WCM5 200 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 SSSCA1O60232 199 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 NXPH3O95157 252 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 LYL1P12980 280 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 NUP62P37198 522 aaPredicted RBP8.26□□□□□ -1.09
RFC1-211ENST00000509084 RPL23AP62750 156 aaKnown RBP8.26□□□□□ -1.09
RFC1-211ENST00000509084 LY6EQ16553 131 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 OXLD1Q5BKU9 147 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 ZNF562Q6V9R5 426 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 TMEM219Q86XT9 240 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 SIGLECL1Q8N7X8 197 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 RBMXL1Q96E39 390 aaKnown RBP8.26□□□□□ -1.09
RFC1-211ENST00000509084 JMJD8Q96S16 334 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 HIPK2Q9H2X6 1198 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 RBKSQ9H477 322 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 MBD2Q9UBB5 411 aa8.26□□□□□ -1.09
RFC1-211ENST00000509084 RCL1Q9Y2P8 373 aaKnown RBP8.26□□□□□ -1.09
RFC1-211ENST00000509084 VPS13CQ709C8 3753 aa8.25□□□□□ -1.09
RFC1-211ENST00000509084 FXYD6-FXYD2A0A087WZ82 144 aa8.25□□□□□ -1.09
RFC1-211ENST00000509084 TEX50A0A1B0GTY4 177 aa8.25□□□□□ -1.09
RFC1-211ENST00000509084 HMSDA8MTL9 139 aa8.25□□□□□ -1.09
RFC1-211ENST00000509084 G3V3Q6 166 aa8.25□□□□□ -1.09
RFC1-211ENST00000509084 HOXA3O43365 443 aaPredicted RBP8.25□□□□□ -1.09
RFC1-211ENST00000509084 KCNAB3O43448 404 aa8.25□□□□□ -1.09
RFC1-211ENST00000509084 TSC22D2O75157 780 aa8.25□□□□□ -1.09
RFC1-211ENST00000509084 CNIH1O95406 144 aa8.25□□□□□ -1.09
RFC1-211ENST00000509084 HNRNPCP07910 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms