RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 HIST1H2BDP58876 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 LINC00313P59037 77 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 YPEL3P61236 119 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 HIST1H2BCP62807 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 RPS28P62857 69 aaKnown RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 RUNX1Q01196 453 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 FUT5Q11128 374 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 SURF2Q15527 256 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 HIST2H2BEQ16778 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 SAXO1Q8IYX7 474 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 H1FOOQ8IZA3 346 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF561Q8N587 486 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 CYB561D1Q8N8Q1 229 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF709Q8N972 641 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 SPANXA2-OT1Q8N9U9 137 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 FNDC9Q8TBE3 224 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 RBPMSQ93062 196 aaKnown RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 HIST1H2BHQ93079 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 CAPZA3Q96KX2 299 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 LINC00477Q96M19 166 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 IP6K3Q96PC2 410 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 CGREF1Q99674 301 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 HIST1H2BNQ99877 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 HIST1H2BMQ99879 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 TMEM126AQ9H061 195 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 RNASE7Q9H1E1 156 aaKnown RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 RNF122Q9H9V4 155 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 PDFQ9HBH1 243 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 LRTM1Q9HBL6 345 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 GSKIPQ9P0R6 139 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 CKLFQ9UBR5 152 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 SS18L2Q9UHA2 77 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 TBX21Q9UL17 535 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 CYSLTR1Q9Y271 337 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 KLK5Q9Y337 293 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 TET2Q6N021 2002 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 ARHGEF10O15013 1369 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 CPDO75976 1380 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 TRAV4A0A0B4J268 109 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 A0A1W2PRE2 83 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 A8MWP6 167 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 C19orf84I3L1E1 186 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 LST1O00453 97 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 DEGS1O15121 323 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SLC25A20O43772 301 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 TPST1O60507 370 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 GGCTO75223 188 aaKnown RBP1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SULT1C4O75897 302 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 CDS2O95674 445 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 C1QAP02745 245 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SMIM17P0DL12 118 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 IGHV3-30-3P0DP02 117 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 CD28P10747 220 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SLC25A16P16260 332 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF823P16415 610 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 OGNP20774 298 aaKnown RBP1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 NPY1RP25929 384 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SDC4P31431 198 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 GLRXP35754 106 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 PSMD8P48556 350 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 DAPP51397 102 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 RPL30P62888 115 aaKnown RBP1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 CCL20P78556 96 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 BSPH1Q075Z2 132 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 HTR4Q13639 388 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF79Q15937 498 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 MRPL51Q4U2R6 128 aaKnown RBP1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SPANXN3Q5MJ09 141 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 BCL2L15Q5TBC7 163 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 AGTRAPQ6RW13 159 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 UNQ9165/PRO28630Q6UXU0 137 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SSX8Q7RTT4 187 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF101Q8IZC7 436 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 OSR2Q8N2R0 312 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF664Q8N3J9 261 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 OR2T4Q8NH00 348 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 OR5J2Q8NH18 312 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 UBALD1Q8TB05 177 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SLC25A40Q8TBP6 338 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 CIRBP-AS1Q8TBR5 109 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 YPEL2Q96QA6 119 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 B9D2Q9BPU9 175 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 DOHHQ9BU89 302 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 RTL8AQ9BWD3 113 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 OR2J1Q9GZK6 312 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 OR2D2Q9H210 308 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 EFCAB1Q9HAE3 211 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 WFDC1Q9HC57 220 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SLC39A9Q9NUM3 307 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 MED29Q9NX70 200 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 RASL12Q9NYN1 266 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 COPZ2Q9P299 210 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SLC23A2Q9UGH3 650 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 COQ4Q9Y3A0 265 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 SETD5Q9C0A6 1442 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 NCOA3Q9Y6Q9 1424 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 ITGB4P16144 1822 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 NAV1Q8NEY1 1877 aa1.54□□□□□ -2.16
DEPDC1B-204ENST00000509006 DICER1Q9UPY3 1922 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms