RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 OR4A5Q8NH83 315 aa9.81□□□□□ -0.84
HMGCS1-205ENST00000508319 DYNLRB2Q8TF09 96 aa9.81□□□□□ -0.84
HMGCS1-205ENST00000508319 NEURL2Q9BR09 285 aa9.81□□□□□ -0.84
HMGCS1-205ENST00000508319 SLC5A7Q9GZV3 580 aa9.81□□□□□ -0.84
HMGCS1-205ENST00000508319 WFDC10AQ9H1F0 79 aa9.81□□□□□ -0.84
HMGCS1-205ENST00000508319 GAR1Q9NY12 217 aaKnown RBP9.81□□□□□ -0.84
HMGCS1-205ENST00000508319 S4R3C0 116 aa9.81□□□□□ -0.84
HMGCS1-205ENST00000508319 IGLV11-55A0A075B6I3 123 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 LCE6AA0A183 80 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 IGLC7A0M8Q6 106 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 TMEM213A2RRL7 107 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 MFSD2BA6NFX1 497 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 A8MWP6 167 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 DHFRP00374 187 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 REG1AP05451 166 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 ARL3P36405 182 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 TGFBR1P36897 503 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 TAS2R31P59538 309 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 FXYD4P59646 89 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 CATR1Q13166 79 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 KCTD21Q4G0X4 260 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 ZNF818PQ6ZRF7 136 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 TMEM17Q86X19 198 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 GPHB5Q86YW7 130 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 GIMAP1Q8WWP7 306 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 CACNG8Q8WXS5 425 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 WDR89Q96FK6 387 aaPredicted RBP9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 RETNQ9HD89 108 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 DIABLOQ9NR28 239 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 SLC2A8Q9NY64 477 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 CEPT1Q9Y6K0 416 aa9.8□□□□□ -0.84
HMGCS1-205ENST00000508319 TRAV3A0A0B4J244 114 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 MEIS3P1A6NDR6 274 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 TMEM127O75204 238 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 TPPPO94811 219 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 HPRT1P00492 218 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 CBX5P45973 191 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 OR2B8PP59922 312 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 CLEC19AQ6UXS0 136 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 DEFB125Q8N687 156 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 OR5AP2Q8NGF4 316 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 OR51H1Q8NH63 302 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 EEF1AKMT3Q96AZ1 226 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 HIPK2Q9H2X6 1198 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 HRASLSQ9HDD0 168 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 TECRQ9NZ01 308 aaKnown RBP9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 ANAPC10Q9UM13 185 aa9.79□□□□□ -0.84
HMGCS1-205ENST00000508319 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 UPK2O00526 184 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 XRCC3O43542 346 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 S1PR2O95136 353 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 IFNA6P05013 189 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 FGF2P09038 288 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 DEFA4P12838 97 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 NQO2P16083 231 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 HIST1H1BP16401 226 aaKnown RBP9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 CBLN1P23435 193 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 TMEM61Q8N0U2 210 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 AIFM2Q9BRQ8 373 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 PLEKHA2Q9HB19 425 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 COMMD9Q9P000 198 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 MLXQ9UH92 298 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 SELENOKQ9Y6D0 94 aa9.78□□□□□ -0.84
HMGCS1-205ENST00000508319 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 TRBV7-1A0A0A6YYK4 115 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 GNRHRP30968 328 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 HERV-K104P61576 105 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 GUCA2BQ16661 112 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 UBE2NLQ5JXB2 153 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 AADACL3Q5VUY0 350 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 UNQ9165/PRO28630Q6UXU0 137 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 ZNF502Q8TBZ5 544 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 FAM110AQ9BQ89 295 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 SRSF8Q9BRL6 282 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 QTRT1Q9BXR0 403 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 SRD5A3Q9H8P0 318 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 IFT46Q9NQC8 304 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 EHFQ9NZC4 300 aa9.77□□□□□ -0.85
HMGCS1-205ENST00000508319 HYDINQ4G0P3 5121 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 ZNF320A2RRD8 509 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 RLN1P04808 185 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 CLEC3BP05452 202 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 GPR183P32249 361 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 RPS19P39019 145 aaKnown RBP9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 RFX2P48378 723 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 FAM106AQ4KMX7 169 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 ZNF57Q68EA5 555 aaPredicted RBP9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 DMBX1Q8NFW5 382 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 OR10W1Q8NGF6 305 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 CD300LFQ8TDQ1 290 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 MOB3AQ96BX8 217 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 S100A16Q96FQ6 103 aaKnown RBP9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 CXorf58Q96LI9 332 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 COMMD5Q9GZQ3 224 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 FXYD6Q9H0Q3 95 aa9.76□□□□□ -0.85
HMGCS1-205ENST00000508319 MARCH11A6NNE9 402 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms