RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PHLDA2Q53GA4 152 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 RNASE12Q5GAN4 147 aaKnown RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 OR4A47Q6IF82 309 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 KLHDC1Q8N7A1 406 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 MYOZ3Q8TDC0 251 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 GLYATL2Q8WU03 294 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 QTRT1Q9BXR0 403 aaKnown RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 FBXL15Q9H469 300 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 ZNF430Q9H8G1 570 aaPredicted RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 TNFRSF19Q9NS68 423 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 TMEM140Q9NV12 185 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 THYN1Q9P016 225 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 A0A1B0GU03 582 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 FAM223BA6NKX1 122 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 CORTO00230 105 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 PLA2G10O15496 165 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 TNFSF12O43508 249 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 RAMP3O60896 148 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 S1PR2O95136 353 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 PTTG1O95997 202 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 CA2P00918 260 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 TCRBP04435 133 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 IL5P05113 134 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 CRYGCP07315 174 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 P0C879 139 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 RPL27AP46776 148 aaKnown RBP6.66□□□□□ -1.34
PDGFC-205ENST00000506880 CCR6P51684 374 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 AKR1C2P52895 323 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 TMEM187Q14656 261 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 TRIM16LQ309B1 348 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 TMEM65Q6PI78 240 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 ZNF695Q8IW36 515 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 FAM223AQ8IWN6 122 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 TTC9CQ8N5M4 171 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 ZNF114Q8NC26 417 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 OR4F17Q8NGA8 305 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 OR5AU1Q8NGC0 362 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 OR4A16Q8NH70 328 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 COQ8AQ8NI60 647 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 FAM110DQ8TAY7 271 aaPredicted RBP6.66□□□□□ -1.34
PDGFC-205ENST00000506880 SRSF12Q8WXF0 261 aaKnown RBP6.66□□□□□ -1.34
PDGFC-205ENST00000506880 UBE2E2Q96LR5 201 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 OR4F4Q96R69 305 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 PDCD10Q9BUL8 212 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 GPR61Q9BZJ8 451 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.66□□□□□ -1.34
PDGFC-205ENST00000506880 GAR1Q9NY12 217 aaKnown RBP6.66□□□□□ -1.34
PDGFC-205ENST00000506880 VSIG4Q9Y279 399 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 ANK2Q01484 3957 aa6.66□□□□□ -1.34
PDGFC-205ENST00000506880 SNRPGP15A8MWD9 76 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 J3QRK9 145 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 ATP6V0E1O15342 81 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 MED6O75586 246 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 SFT2D2O95562 160 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 OR5AC1P0C628 307 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 OR9G9P0C7N8 305 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 TRAPPC2P0DI81 140 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 TRAPPC2BP0DI82 140 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 PAX6P26367 422 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 BTCP35070 178 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 SPCS3P61009 180 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 HSPE1P61604 102 aaKnown RBP6.65□□□□□ -1.34
PDGFC-205ENST00000506880 C9orf152Q5JTZ5 239 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 LYG2Q86SG7 212 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 ENKURQ8TC29 256 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 TP53RKQ96S44 253 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 PHB2Q99623 299 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 C20orf85Q9H1P6 137 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 GPN1Q9HCN4 374 aaPredicted RBP6.65□□□□□ -1.34
PDGFC-205ENST00000506880 NDUFA4L2Q9NRX3 87 aa6.65□□□□□ -1.34
PDGFC-205ENST00000506880 ZMAT5Q9UDW3 170 aaKnown RBP6.65□□□□□ -1.34
PDGFC-205ENST00000506880 TRBV9A0A0B4J1U6 114 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 KRASP01116 189 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 IFNA21P01568 189 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 OR4E1P0C645 316 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 SULT1A3P0DMM9 295 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 SULT1A4P0DMN0 295 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 EGR2P11161 476 aaPredicted RBP6.64□□□□□ -1.35
PDGFC-205ENST00000506880 AKR1C4P17516 323 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 CNTFRP26992 372 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 SUB1P53999 127 aaKnown RBP eCLIP6.64□□□□□ -1.35
PDGFC-205ENST00000506880 OR2B8PP59922 312 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 SUPT4H1P63272 117 aaKnown RBP6.64□□□□□ -1.35
PDGFC-205ENST00000506880 ERHP84090 104 aaKnown RBP6.64□□□□□ -1.35
PDGFC-205ENST00000506880 PRCDQ00LT1 54 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 TNXAQ16473 311 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 MRGPRG-AS1Q2M3A8 158 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 NMSQ5H8A3 153 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 FAAP20Q6NZ36 180 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 PLET1Q6UQ28 207 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 UNQ5815/PRO19632Q6UWF5 114 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 NECAP1Q8NC96 275 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 RNASE11Q8TAA1 199 aaKnown RBP6.64□□□□□ -1.35
PDGFC-205ENST00000506880 MITD1Q8WV92 249 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 C4orf3Q8WVX3 66 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 ASB13Q8WXK3 278 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 TMEM230Q96A57 120 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 RITA1Q96K30 269 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 CXorf58Q96LI9 332 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 CIB3Q96Q77 187 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms