RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 POU2AF1Q16633 256 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 SSX9Q7RTT3 188 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 CCDC190Q86UF4 302 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 SLC25A42Q86VD7 318 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 PUSL1Q8N0Z8 303 aaKnown RBP5.67□□□□□ -1.5
GYPB-206ENST00000506516 TOMM5Q8N4H5 51 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 CCDC71LQ8N9Z2 235 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 OR5T1Q8NG75 326 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 OR4D10Q8NGI6 311 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 CHAC2Q8WUX2 184 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 SRSF12Q8WXF0 261 aaKnown RBP5.67□□□□□ -1.5
GYPB-206ENST00000506516 PRRT1Q99946 306 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 KLK15Q9H2R5 256 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 SLC2A9Q9NRM0 540 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 BET1LQ9NYM9 111 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 COMMD9Q9P000 198 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 COPZ2Q9P299 210 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 SCP2D1Q9UJQ7 156 aa5.67□□□□□ -1.5
GYPB-206ENST00000506516 C14orf166Q9Y224 244 aaKnown RBP5.67□□□□□ -1.5
GYPB-206ENST00000506516 TET2Q6N021 2002 aaPredicted RBP5.66□□□□□ -1.5
GYPB-206ENST00000506516 A0A0G2JLM5 398 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 CCL24O00175 119 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 UPK2O00526 184 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 B3GALNT1O75752 331 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 SNAPC5O75971 98 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 ATG12O94817 140 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 S1PR2O95136 353 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 BRI3O95415 125 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 KRASP01116 189 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 TRGV3P03979 118 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 CTSDP07339 412 aaPredicted RBP5.66□□□□□ -1.5
GYPB-206ENST00000506516 FGF2P09038 288 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 OR9G9P0C7N8 305 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 ZNF735P0CB33 412 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 RPA2P15927 270 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 HLA-GP17693 338 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 RPL27AP46776 148 aaKnown RBP5.66□□□□□ -1.5
GYPB-206ENST00000506516 INPP1P49441 399 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 PPP5CP53041 499 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 TPPP2P59282 170 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 RPL8P62917 257 aaKnown RBP5.66□□□□□ -1.5
GYPB-206ENST00000506516 SSBP2P81877 361 aaPredicted RBP5.66□□□□□ -1.5
GYPB-206ENST00000506516 SURF2Q15527 256 aaPredicted RBP5.66□□□□□ -1.5
GYPB-206ENST00000506516 MRGPRG-AS1Q2M3A8 158 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 ZNF585BQ52M93 769 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 OR4A47Q6IF82 309 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 LCNL1Q6ZST4 164 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 CADM3Q8N126 398 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 ZNF491Q8N8L2 437 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 WFDC9Q8NEX5 89 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 OR51S1Q8NGJ8 323 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 OR4C16Q8NGL9 310 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 OR6Q1Q8NGQ2 317 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 MARCH1Q8TCQ1 289 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 C4orf3Q8WVX3 66 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 DEDD2Q8WXF8 326 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 DPF1Q92782 380 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 MS4A10Q96PG2 267 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 FYTTD1Q96QD9 318 aaKnown RBP5.66□□□□□ -1.5
GYPB-206ENST00000506516 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 COMMD5Q9GZQ3 224 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 TMEM140Q9NV12 185 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 MCUBQ9NWR8 336 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 COA4Q9NYJ1 87 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 FKBP11Q9NYL4 201 aa5.66□□□□□ -1.5
GYPB-206ENST00000506516 TEX13DA0A0J9YY54 714 aaPredicted RBP5.65□□□□□ -1.5
GYPB-206ENST00000506516 C3orf85A0A1B0GTC6 90 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 C13orf42A0A1B0GVH6 325 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 MARCH11A6NNE9 402 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 SOX15O60248 233 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 DUS4LO95620 317 aaKnown RBP5.65□□□□□ -1.5
GYPB-206ENST00000506516 DHFRP00374 187 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 IL6RP08887 468 aaPredicted RBP5.65□□□□□ -1.5
GYPB-206ENST00000506516 APELAP0DMC3 54 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 PI3P19957 117 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 G6PCP35575 357 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 RUNX1Q01196 453 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 ZNF45Q02386 682 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 KIAA0141Q14154 515 aaPredicted RBP5.65□□□□□ -1.5
GYPB-206ENST00000506516 ZNF79Q15937 498 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 ZNF57Q68EA5 555 aaPredicted RBP5.65□□□□□ -1.5
GYPB-206ENST00000506516 FAAP20Q6NZ36 180 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 C18orf65Q6ZTR6 163 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 H2BFWTQ7Z2G1 175 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 TTC9CQ8N5M4 171 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 GDPD1Q8N9F7 314 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 OR11H1Q8NG94 326 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 OR1N2Q8NGR9 330 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 OR13C8Q8NGS7 320 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 MYOZ3Q8TDC0 251 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 CASTOR1Q8WTX7 329 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 USMG5Q96IX5 58 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 TSC22D3Q99576 134 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 MCRIP2Q9BUT9 160 aaKnown RBP5.65□□□□□ -1.5
GYPB-206ENST00000506516 SLC2A8Q9NY64 477 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 GPR132Q9UNW8 380 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 KCNIP3Q9Y2W7 256 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 V9GYH0 126 aa5.65□□□□□ -1.5
GYPB-206ENST00000506516 hCG_2014768A0A024R1R8 64 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms