RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 A0A075B6Q4 140 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 TMEM272A0A1B0GTI8 110 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 HMX3A6NHT5 357 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 IGLL5B9A064 214 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 J3QRK9 145 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 RAB27BO00194 218 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 MFNGO00587 321 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 XRCC3O43542 346 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 DENRO43583 198 aaKnown RBP4.38□□□□□ -1.71
GYPB-204ENST00000504951 OR2C1O95371 312 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 IGLV2-14P01704 120 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 IGHV3-23P01764 117 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 AMBPP02760 352 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 SAA1P0DJI8 122 aaPredicted RBP4.38□□□□□ -1.71
GYPB-204ENST00000504951 MYOD1P15172 320 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 GNB3P16520 340 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 SERPINB10P48595 397 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 OR10A3P58181 314 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 BRWD1-AS2P59051 145 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 UBE2KP61086 200 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 RPL30P62888 115 aaKnown RBP4.38□□□□□ -1.71
GYPB-204ENST00000504951 FABP5Q01469 135 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 RCN1Q15293 331 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 RAB11BQ15907 218 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 RTL8BQ17RB0 113 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 C15orf32Q32M92 178 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 OR2B11Q5JQS5 317 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 SOHLH1Q5JUK2 328 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 HES5Q5TA89 166 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 OGFRL1Q5TC84 451 aaPredicted RBP4.38□□□□□ -1.71
GYPB-204ENST00000504951 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 RBPMS2Q6ZRY4 209 aaKnown RBP4.38□□□□□ -1.71
GYPB-204ENST00000504951 ZNF575Q86XF7 245 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 H1FOOQ8IZA3 346 aaPredicted RBP4.38□□□□□ -1.71
GYPB-204ENST00000504951 VKORC1L1Q8N0U8 176 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 OR10J5Q8NHC4 309 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 CCDC140Q96MF4 163 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 GPHA2Q96T91 129 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 C6orf62Q9GZU0 229 aaPredicted RBP4.38□□□□□ -1.71
GYPB-204ENST00000504951 MGAT4AQ9UM21 535 aa4.38□□□□□ -1.71
GYPB-204ENST00000504951 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 TRAV10A0A0B4J240 114 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 IGKV1D-13A0A0B4J2D9 117 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 MPTX1A8MV57 137 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 TEX22C9J3V5 150 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 MPPED1O15442 326 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 FCGR3BO75015 233 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 CD74P04233 296 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 IL6RP08887 468 aaPredicted RBP4.37□□□□□ -1.71
GYPB-204ENST00000504951 HSMCR30P0CW71 290 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 IGKV1-13P0DP09 117 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 RRASP10301 218 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 AREGP15514 252 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 CALRP27797 417 aaKnown RBP4.37□□□□□ -1.71
GYPB-204ENST00000504951 TPBGQ13641 420 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 SSX1Q16384 188 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 ODF3L2Q3SX64 289 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 VMA21Q3ZAQ7 101 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 LAMTOR1Q6IAA8 161 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 CLEC19AQ6UXS0 136 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 OR56B1Q8NGI3 324 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 OR11H2Q8NH07 326 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 UFD1Q92890 307 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 RAB3CQ96E17 227 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 FAM210BQ96KR6 192 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 ATP6V0BQ99437 205 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 SPIN2AQ99865 258 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 SPIN2BQ9BPZ2 258 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 ZNF436Q9C0F3 470 aaPredicted RBP4.37□□□□□ -1.71
GYPB-204ENST00000504951 FBXL17Q9UF56 701 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 ZNF257Q9Y2Q1 563 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 V9GY05 133 aa4.37□□□□□ -1.71
GYPB-204ENST00000504951 IGHV4-4A0A075B6R2 117 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 TRBV7-1A0A0A6YYK4 115 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 SMIM30A4D0T7 59 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 CGB1A6NKQ9 187 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 NPIPB5A8MRT5 1133 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 CASQ2O14958 399 aaPredicted RBP4.36□□□□□ -1.71
GYPB-204ENST00000504951 CREBL2O60519 120 aaPredicted RBP4.36□□□□□ -1.71
GYPB-204ENST00000504951 SCAF4O95104 1147 aaKnown RBP4.36□□□□□ -1.71
GYPB-204ENST00000504951 DIRAS3O95661 229 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 REG1AP05451 166 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 CRYGCP07315 174 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 HIST1H1DP16402 221 aaKnown RBP4.36□□□□□ -1.71
GYPB-204ENST00000504951 NFYAP23511 347 aaPredicted RBP4.36□□□□□ -1.71
GYPB-204ENST00000504951 EIF4EBP1Q13541 118 aaPredicted RBP4.36□□□□□ -1.71
GYPB-204ENST00000504951 CDK10Q15131 360 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 RNF212Q495C1 297 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 TMEM41BQ5BJD5 291 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 UNQ9165/PRO28630Q6UXU0 137 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 ZNF645Q8N7E2 425 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 Q8NAQ8 132 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 OR10R2Q8NGX6 335 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 OSR1Q8TAX0 266 aaPredicted RBP4.36□□□□□ -1.71
GYPB-204ENST00000504951 ADTRPQ96IZ2 230 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 GINS4Q9BRT9 223 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 DCUN1D5Q9BTE7 237 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 DUSP21Q9H596 190 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 SCRT2Q9NQ03 307 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 C8orf4Q9NR00 106 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms