RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	SAA2	P0DJI9	122 aa	Predicted RBP	11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	SLC25A4	P12235	298 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	DUT	P33316	252 aa	Known RBP	11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	AKR1C2	P52895	323 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	S100A10	P60903	97 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	RPL39P5	Q59GN2	51 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	C11orf87	Q6NUJ2	197 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	C1QL4	Q86Z23	238 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	GRPEL2	Q8TAA5	225 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	R3HDM4	Q96D70	268 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	C5orf30	Q96GV9	206 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	TXNL1	O43396	289 aa		11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	CD1B	P29016	333 aa		11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	NUP62	P37198	522 aa	Predicted RBP	11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	THBS3	P49746	956 aa		11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	RPL30	P62888	115 aa	Known RBP	11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	OR2B11	Q5JQS5	317 aa		11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	ZNF546	Q86UE3	836 aa		11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	C9orf62	Q8N4C0	152 aa		11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	OR4F17	Q8NGA8	305 aa		11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	LSM10	Q969L4	123 aa	Known RBP	11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	OR4F4	Q96R69	305 aa		11.64	□□□□□ -0.55
CNBP-208	ENST00000504813	PRKDC	P78527	4128 aa	Known RBP	11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	TRAV14DV4	A0A0A6YYC5	116 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813		G3V4G9	280 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813		L7N2F9	121 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	ARPC5	O15511	151 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	SCGB1D2	O95969	90 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	ZNF585B	Q52M93	769 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	SAMD5	Q5TGI4	173 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	TMEM65	Q6PI78	240 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	TGIF2LX	Q8IUE1	241 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	ODF3L1	Q8IXM7	274 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	OR2T10	Q8NGZ9	312 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813	PLSCR3	Q9NRY6	295 aa		11.63	□□□□□ -0.55
CNBP-208	ENST00000504813		A0A1B0GU03	582 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813		A0A1W2PRX2	142 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	LINC00473	A8K010	186 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	FCGR3B	O75015	233 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	IGHG2	P01859	326 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	SLC25A6	P12236	298 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	RAB32	Q13637	225 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	NMS	Q5H8A3	153 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	PRSS54	Q6PEW0	395 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	FAM219A	Q8IW50	185 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813		Q8N9W7	124 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	OR4X2	Q8NGF9	303 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	DCUN1D4	Q92564	292 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	RBMXL1	Q96E39	390 aa	Known RBP	11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	MBD2	Q9UBB5	411 aa		11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.62	□□□□□ -0.55
CNBP-208	ENST00000504813	TCRBV4S1A1T	A0A5B7	111 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	PSMB11	A5LHX3	300 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.61	□□□□□ -0.55	6e-10	■■■□□ 18.8
CNBP-208	ENST00000504813	RAMP3	O60896	148 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	HPRT1	P00492	218 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	MOS	P00540	346 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	IL15RA	Q13261	267 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	BEAN1	Q3B7T3	259 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	LAMTOR1	Q6IAA8	161 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	FAM71F2	Q6NXP2	309 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	FOXRED2	Q8IWF2	684 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	OR4S2	Q8NH73	311 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	OR1S1	Q8NH92	325 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	NOL4L	Q96MY1	436 aa	Predicted RBP	11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	MFF	Q9GZY8	342 aa		11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	LSM5	Q9Y4Y9	91 aa	Known RBP	11.61	□□□□□ -0.55
CNBP-208	ENST00000504813	LINC01548	A6NM66	108 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	NCBP2L	A6PVI3	153 aa	Known RBP	11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	ST8SIA3	O43173	380 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	PROP1	O75360	226 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	IGKV1-39	P01597	117 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	IGKV1D-39	P04432	117 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	NKX2-1	P43699	371 aa	Predicted RBP	11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	ERVK-16	P61578	105 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	TAGLN	Q01995	201 aa	Known RBP	11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	KPRP	Q5T749	579 aa	Predicted RBP	11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	ZNF833P	Q6ZTB9	187 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	SLC35E3	Q7Z769	313 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	ZNF329	Q86UD4	541 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	GPR146	Q96CH1	333 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	ZNF251	Q9BRH9	671 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	PLEKHA2	Q9HB19	425 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813		A0A0D9SG52	128 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	WRB	O00258	174 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	TSC22D2	O75157	780 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	S1PR2	O95136	353 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	KRAS	P01116	189 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	IGKV1-5	P01602	117 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	APOA2	P02652	100 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	MBP	P02686	304 aa	Predicted RBP	11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	PVALB	P20472	110 aa	Predicted RBP	11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	F2RL1	P55085	397 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	RTL8B	Q17RB0	113 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	ACOT7L	Q6ZUV0	252 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	H2BFWT	Q7Z2G1	175 aa		11.6	□□□□□ -0.55
CNBP-208	ENST00000504813	FAM71E2	Q8N5Q1	922 aa		11.6	□□□□□ -0.55

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