RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 NHLRC4P0CG21 123 aaPredicted RBP10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 GP9P14770 177 aa10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 RNASE12Q5GAN4 147 aaKnown RBP10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 OR2B11Q5JQS5 317 aa10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 VKORC1L1Q8N0U8 176 aa10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 Q8N1Y9 231 aa10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 TTC9CQ8N5M4 171 aa10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 TMEM167AQ8TBQ9 72 aa10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 GPX8Q8TED1 209 aa10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 HSD17B10Q99714 261 aaKnown RBP10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 RANGRFQ9HD47 186 aaPredicted RBP10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 CCL28Q9NRJ3 127 aa10.68□□□□□ -0.7
PDLIM7-211ENST00000504318 A0A0G2JLM5 398 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 KBTBD11O94819 623 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 PPYP01298 95 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 PRH1P02810 166 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 FCGR2CP31995 323 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 MECP2P51608 486 aaKnown RBP10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 CBX3Q13185 183 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 ZNF66Q6ZN08 573 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 C19orf35Q6ZS72 473 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 MMD2Q8IY49 270 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 USMG5Q96IX5 58 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 WWC2-AS2Q96NR7 200 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 ZNF355PQ9NSJ1 428 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 NBEAL2Q6ZNJ1 2754 aa10.67□□□□□ -0.7
PDLIM7-211ENST00000504318 C13orf42A0A1B0GVH6 325 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 ANKRD34BA5PLL1 514 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 BMPR1BO00238 502 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 ZNF735P0CB33 412 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 NAT1P18440 290 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 ZP3P21754 424 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 RCVRNP35243 200 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 CBX5P45973 191 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 TAS2R19P59542 299 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 SBSPONQ8IVN8 264 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 OR4S2Q8NH73 311 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 GIMAP1Q8WWP7 306 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 FANCD2OSQ96PS1 177 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 ASCL2Q99929 193 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 COA4Q9NYJ1 87 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 PEF1Q9UBV8 284 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 KLK11Q9UBX7 282 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 PRELID3BQ9Y3B1 194 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 SMAD5-AS1Q9Y6J3 95 aa10.66□□□□□ -0.7
PDLIM7-211ENST00000504318 CSMD3Q7Z407 3707 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 HMX3A6NHT5 357 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 OR2A4O95047 310 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 FCER2P06734 321 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 CSN3P07498 182 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 AKAIN1P0CW23 69 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 MYOD1P15172 320 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 TBPP20226 339 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 POU2AF1Q16633 256 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 ZNF818PQ6ZRF7 136 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 TMEM229BQ8NBD8 167 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 OR5AP2Q8NGF4 316 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 OR9G4Q8NGQ1 327 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 TCTEX1D2Q8WW35 142 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 OR2A7Q96R45 310 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 MARVELD1Q9BSK0 173 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 HRASLSQ9HDD0 168 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 IFT46Q9NQC8 304 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 SIGLEC8Q9NYZ4 499 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 U3KQK5 164 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 RYR3Q15413 4870 aa10.65□□□□□ -0.7
PDLIM7-211ENST00000504318 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 MEIS3P1A6NDR6 274 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 FAM223BA6NKX1 122 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 NPIPB5A8MRT5 1133 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 RBFOX2O43251 390 aaKnown RBP eCLIP10.64□□□□□ -0.718e-13■■■□□ 18.5
PDLIM7-211ENST00000504318 TNFSF12O43508 249 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 LY86O95711 162 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 DHFRP00374 187 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 CRYGCP07315 174 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 TRAPPC2P0DI81 140 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 TRAPPC2BP0DI82 140 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 GNRHRP30968 328 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 BTCP35070 178 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 ARPC4P59998 168 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 RHOGP84095 191 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 MEF2DQ14814 521 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 DHRS11Q6UWP2 260 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 FAM223AQ8IWN6 122 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 CADM3Q8N126 398 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 ZBTB34Q8NCN2 500 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 CHAC2Q8WUX2 184 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 SECTM1Q8WVN6 248 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 PHB2Q99623 299 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 SPIN2AQ99865 258 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 SPIN2BQ9BPZ2 258 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 BET1LQ9NYM9 111 aa10.64□□□□□ -0.71
PDLIM7-211ENST00000504318 A8MZ25 164 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 INMT-MINDY4F8WBC2 141 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 CREBL2O60519 120 aaPredicted RBP10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 TCRBP04435 133 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 FRMD6-AS1P0C7T7 363 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 AREGP15514 252 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms