RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 EFEMP2O95967 443 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 HLA-DRB1P01911 266 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 SRIP30626 198 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 ZNF660Q6AZW8 331 aaPredicted RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 OR13A1Q8NGR1 328 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 OR10AG1Q8NH19 301 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 HINT1P49773 126 aaPredicted RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 ICAM4Q14773 271 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 JOSD1Q15040 202 aaPredicted RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 KBTBD11-OT1A0A1B0GTJ5 212 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 IQCF6A8MYZ5 107 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 C12orf77C9JDV5 145 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 RRHO14718 337 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 SIGLEC5O15389 551 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 AGAP20933 346 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 GPR183P32249 361 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 SAPCD1Q5SSQ6 148 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 CD200R1LQ6Q8B3 271 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 RNASE6Q93091 150 aaKnown RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 C1QTNF5Q9BXJ0 243 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 NPDC1Q9NQX5 325 aaPredicted RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 CBLN4Q9NTU7 201 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 MRPS18CQ9Y3D5 142 aaKnown RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 IGKV1D-43A0A0B4J1Z2 117 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 PSMB11A5LHX3 300 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 IGLV3-19P01714 112 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 UMODP07911 640 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 FABP2P12104 132 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 SUMO2P61956 95 aaKnown RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 OSR1Q8TAX0 266 aaPredicted RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 LINC01587Q99440 93 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 LOC285556D6RIA3 1793 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 TRBV9A0A0B4J1U6 114 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 TGFBR3LH3BV60 316 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 TGFAP01135 160 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 ATP5IP56385 69 aaPredicted RBP6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 RND3P61587 244 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 TFF3Q07654 80 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 PMCHL1Q16048 86 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 CENPWQ5EE01 88 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 OR13C6PQ8NH95 151 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 TM2D1Q9BX74 207 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 NPCDR1Q9BY65 106 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 RALGAPA2Q2PPJ7 1873 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 FOLR2P14207 255 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 IGFBP2P18065 325 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 FAM90A1Q86YD7 464 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 MARVELD3Q96A59 401 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 FMC1Q96HJ9 113 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 ANKRD36A6QL64 1941 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 CASP8AP2Q9UKL3 1982 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 H7C1H1 209 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 DANCRP0C864 163 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 HBBP68871 147 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 MEF2CQ06413 473 aaPredicted RBP6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 TMEM136Q6ZRR5 245 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 ZIC4Q8N9L1 334 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 TCF21O43680 179 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 C2orf88Q9BSF0 95 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 SEMA5BQ9P283 1151 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 BRCA1P38398 1863 aaKnown RBP6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 C17orf98A8MV24 154 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 EMP1P54849 157 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 IFITM3Q01628 133 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 NRN1LQ496H8 165 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 WDR82Q6UXN9 313 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 ERASQ7Z444 233 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 C1QL2Q7Z5L3 287 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 ZNF418Q8TF45 676 aaPredicted RBP6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 SDF2L1Q9HCN8 221 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 LINC00312Q9Y6C7 94 aa6.06□□□□□ -1.44
SYNPO2-205ENST00000504178 PDE4DIPQ5VU43 2346 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 C17orf100A8MU93 164 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 LEPP41159 167 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 LHX2P50458 406 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 HIST1H2BAQ96A08 127 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 TMEM70Q9BUB7 260 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 AKIRIN1Q9H9L7 192 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 PLSCR2Q9NRY7 297 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 FBLL1A6NHQ2 334 aaKnown RBP6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 HTN3P15516 51 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 COL5A1-AS1Q5SY13 56 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 C21orf62Q9NYP8 219 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 THBDP07204 575 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 PDCD11Q14690 1871 aaKnown RBP6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 M0R381 172 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 PAX1P15863 534 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 LTBRP36941 435 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 WNT10AQ9GZT5 417 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 IGHV3-11P01762 117 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 H2BFSP57053 126 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 PRB3Q04118 309 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 KIAA1644Q3SXP7 199 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 PAPPA-AS1Q5QFB9 102 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 STHQ8IWL8 128 aa6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 ARID1BQ8NFD5 2236 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 GOLGB1Q14789 3259 aaKnown RBP6.05□□□□□ -1.44
SYNPO2-205ENST00000504178 TRAV24A0A0B4J272 114 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 GAGE10A6NGK3 116 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 PROB1E7EW31 1015 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms