RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 IGLV2-18A0A075B6J9 118 aa11.46□□□□□ -0.57
PDLIM7-210ENST00000503827 DEFB131BA0A096LNP1 70 aa11.46□□□□□ -0.57
PDLIM7-210ENST00000503827 ZNF207O43670 478 aaKnown RBP11.46□□□□□ -0.57
PDLIM7-210ENST00000503827 IFNA10P01566 189 aa11.46□□□□□ -0.57
PDLIM7-210ENST00000503827 CDK1P06493 297 aa11.46□□□□□ -0.57
PDLIM7-210ENST00000503827 MIFP14174 115 aa11.46□□□□□ -0.57
PDLIM7-210ENST00000503827 PHYHIPQ92561 330 aa11.46□□□□□ -0.57
PDLIM7-210ENST00000503827 RNF2Q99496 336 aa11.46□□□□□ -0.57
PDLIM7-210ENST00000503827 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 OR2T8A6NH00 312 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 FCGR3AP08637 254 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 SSX1Q16384 188 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 ACSM3Q53FZ2 586 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 PLAC9Q5JTB6 97 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 Q6ZR54 194 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 OR56B1Q8NGI3 324 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 OR4S2Q8NH73 311 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 VN1R17PQ8TDU5 208 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 PYDC1Q8WXC3 89 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 BSCL2Q96G97 398 aaPredicted RBP11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 CMTM3Q96MX0 182 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 CHRDL1Q9BU40 450 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 SMPXQ9UHP9 88 aa11.45□□□□□ -0.58
PDLIM7-210ENST00000503827 IGHV3OR16-8A0A075B7F1 116 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 RAB27BO00194 218 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 CYB5BO43169 146 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 IFNA21P01568 189 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 IFNA17P01571 189 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 CD36P16671 472 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 INSL4Q14641 139 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 P2RY14Q15391 338 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 LIPKQ5VXJ0 399 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 SPSB3Q6PJ21 355 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 UBE2DNLQ8IWF7 75 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 H1FOOQ8IZA3 346 aaPredicted RBP11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 CENPOQ9BU64 300 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 HERC1Q15751 4861 aa11.44□□□□□ -0.58
PDLIM7-210ENST00000503827 EFCAB10A6NFE3 127 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 CGB1A6NKQ9 187 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 C15orf62A8K5M9 175 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 J3QRK9 145 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 CD37P11049 281 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 HLA-GP17693 338 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 RPL30P62888 115 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 PAFAH1B2P68402 229 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 TMEM41BQ5BJD5 291 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 C1orf134Q5TEV5 83 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 Q6ZRM9 215 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 RHPN1-AS1Q9BWJ2 59 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 PLGRKTQ9HBL7 147 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 SCRT2Q9NQ03 307 aa11.43□□□□□ -0.58
PDLIM7-210ENST00000503827 ELOA3CA0A087WX78 387 aaPredicted RBP11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 CHEK1O14757 476 aa11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 HRASP01112 189 aa11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 GBGT1Q8N5D6 347 aa11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 MS4A15Q8N5U1 240 aa11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 TMEM116Q8NCL8 245 aa11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 ZNF555Q8NEP9 628 aa11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 MAFIPQ8WZ33 124 aa11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 C9orf16Q9BUW7 83 aa11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 SMPD3Q9NY59 655 aaPredicted RBP11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 RBMX2Q9Y388 322 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-210ENST00000503827 IGHV7-4-1A0A0J9YVY3 117 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 MYL12BO14950 172 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 CIB2O75838 187 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 SLC22A5O76082 557 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 WNT4P56705 351 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 ST3GAL4Q11206 333 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 HSD17B12Q53GQ0 312 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 STHQ8IWL8 128 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 TCTEX1D2Q8WW35 142 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 ATP6V0BQ99437 205 aa11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 HSD17B10Q99714 261 aaKnown RBP11.41□□□□□ -0.58
PDLIM7-210ENST00000503827 IGLC7A0M8Q6 106 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 ZNF705EA8MWA4 302 aaPredicted RBP11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 SLC17A2O00624 439 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 DFFBO76075 338 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 CD74P04233 296 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 RASSF2P50749 326 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 OR2B8PP59922 312 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 C12orf74Q32Q52 190 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 LEMD1Q68G75 181 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 ZNF767PQ75MW2 155 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 RAB3CQ96E17 227 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 SRSF8Q9BRL6 282 aaKnown RBP11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 HRASLSQ9HDD0 168 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 BET1LQ9NYM9 111 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 KCNK7Q9Y2U2 307 aa11.4□□□□□ -0.58
PDLIM7-210ENST00000503827 IGHV3-49A0A0A0MS15 119 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 ERICH4A6NGS2 130 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 DENRO43583 198 aaKnown RBP11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 NPY1RP25929 384 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 DEFB131AP59861 70 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 PLA2G7Q13093 441 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 RAB11BQ15907 218 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 FAM90A2PQ658T7 463 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 SLC25A24Q6NUK1 477 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 UBAC2Q8NBM4 344 aa11.39□□□□□ -0.59
PDLIM7-210ENST00000503827 AIFM2Q9BRQ8 373 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms