RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GGCTO75223 188 aaKnown RBP9.56□□□□□ -0.88
USP46-204ENST00000503060 C1QL1O75973 258 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 KRASP01116 189 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 PRH1P02810 166 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 CD55P08174 381 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 IRF2P14316 349 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 LOXL3P58215 753 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 RANP62826 216 aaKnown RBP9.56□□□□□ -0.88
USP46-204ENST00000503060 TMEM267Q0VDI3 215 aaPredicted RBP9.56□□□□□ -0.88
USP46-204ENST00000503060 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 DUX4L9Q6RFH8 374 aaPredicted RBP9.56□□□□□ -0.88
USP46-204ENST00000503060 OR2G3Q8NGZ4 309 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 C1orf159Q96HA4 380 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 SFRP2Q96HF1 295 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 ZNF665Q9H7R5 613 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 SRD5A3Q9H8P0 318 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 KCNJ16Q9NPI9 418 aa9.56□□□□□ -0.88
USP46-204ENST00000503060 C17orf100A8MU93 164 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 CNIH1O95406 144 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 CLDN14O95500 239 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 TSPAN15O95858 294 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 HIST1H1BP16401 226 aaKnown RBP9.55□□□□□ -0.88
USP46-204ENST00000503060 TAS2R30P59541 319 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 C17orf58Q2M2W7 97 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 MIDNQ504T8 468 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 C10orf91Q5T1B1 145 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 TEX36Q5VZQ5 186 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 ADAM5Q6NVV9 412 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 ZNF788Q6ZQV5 615 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 TGIF2LYQ8IUE0 185 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 PLPPR2Q96GM1 343 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 CCL13Q99616 98 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 C20orf24Q9BUV8 137 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 PITPNC1Q9UKF7 332 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 RFNGQ9Y644 331 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 PIEZO2Q9H5I5 2752 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 TRGV8A0A0C4DH27 118 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 PROP1O75360 226 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 GYPAP02724 150 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 LINC00205P59089 165 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 CCL8P80075 99 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 TNXAQ16473 311 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 GNPNAT1Q96EK6 184 aaPredicted RBP9.55□□□□□ -0.88
USP46-204ENST00000503060 RAX2Q96IS3 184 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 FAM234AQ9H0X4 552 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 RAB9BQ9NP90 201 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 HSPB7Q9UBY9 170 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 LAMP3Q9UQV4 416 aa9.55□□□□□ -0.88
USP46-204ENST00000503060 CARHSP1Q9Y2V2 147 aaKnown RBP9.55□□□□□ -0.88
USP46-204ENST00000503060 DSCAMO60469 2012 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 RAB29O14966 203 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 SIAH2O43255 324 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 DUTP33316 252 aaKnown RBP9.54□□□□□ -0.88
USP46-204ENST00000503060 UBE2KP61086 200 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 SSX7Q7RTT5 188 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 OR4C5Q8NGB2 326 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 FAM213BQ8TBF2 198 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 PTH2Q96A98 100 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 RBKSQ9H477 322 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.54□□□□□ -0.88
USP46-204ENST00000503060 TRGV10A0A0A0MS01 117 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 CXorf65A6NEN9 183 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 LRRC30A6NM36 301 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 M0R036 132 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 TSPAN13O95857 204 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 IFNA17P01571 189 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 SNCAP37840 140 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 ZNF134P52741 427 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 GUCA2BQ16661 112 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 FAM216BQ8N7L0 139 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 NOL4LQ96MY1 436 aaPredicted RBP9.54□□□□□ -0.88
USP46-204ENST00000503060 SEC11CQ9BY50 192 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 NKX6-2Q9C056 277 aaPredicted RBP9.54□□□□□ -0.88
USP46-204ENST00000503060 IFI27L2Q9H2X8 130 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 BEX4Q9NWD9 120 aaPredicted RBP9.54□□□□□ -0.88
USP46-204ENST00000503060 BSNQ9UPA5 3926 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 ICE1Q9Y2F5 2266 aa9.54□□□□□ -0.88
USP46-204ENST00000503060 KBTBD11-OT1A0A1B0GTJ5 212 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 OR11H12B2RN74 326 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 DVL1P1P54792 670 aaPredicted RBP9.53□□□□□ -0.88
USP46-204ENST00000503060 SELENOTP62341 195 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 RUNX1Q01196 453 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 TLE1Q04724 770 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 SRSF1Q07955 248 aaKnown RBP eCLIP9.53□□□□□ -0.88
USP46-204ENST00000503060 ARL16Q0P5N6 197 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 MRPL23Q16540 153 aaKnown RBP9.53□□□□□ -0.88
USP46-204ENST00000503060 NCMAPQ5T1S8 102 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 TCF23Q7RTU1 214 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 H2BFWTQ7Z2G1 175 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 CENPVQ7Z7K6 275 aaPredicted RBP9.53□□□□□ -0.88
USP46-204ENST00000503060 HAPLN4Q86UW8 402 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 ZCCHC24Q8N2G6 241 aaKnown RBP9.53□□□□□ -0.88
USP46-204ENST00000503060 SVBPQ8N300 66 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 OR11H1Q8NG94 326 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 OR11H2Q8NH07 326 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 CLN8Q9UBY8 286 aa9.53□□□□□ -0.88
USP46-204ENST00000503060 RAI1Q7Z5J4 1906 aaPredicted RBP9.53□□□□□ -0.88
USP46-204ENST00000503060 DYSFO75923 2080 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms