RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 COMMD1Q8N668 190 aa17.8■□□□□ 0.44
PTPN13-205ENST00000502971 RPEQ96AT9 228 aa17.8■□□□□ 0.44
PTPN13-205ENST00000502971 LINC00052Q96N35 136 aa17.8■□□□□ 0.44
PTPN13-205ENST00000502971 USP9YO00507 2555 aaPredicted RBP17.8■□□□□ 0.44
PTPN13-205ENST00000502971 IGHV1-3A0A0C4DH29 117 aa17.79■□□□□ 0.44
PTPN13-205ENST00000502971 UBE2L5PA0A1B0GUS4 154 aa17.79■□□□□ 0.44
PTPN13-205ENST00000502971 FAM213BQ8TBF2 198 aa17.79■□□□□ 0.44
PTPN13-205ENST00000502971 TAF15Q92804 592 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPN13-205ENST00000502971 PSMG3-AS1Q96PY0 264 aa17.79■□□□□ 0.44
PTPN13-205ENST00000502971 BPESC1Q9GZL8 116 aa17.79■□□□□ 0.44
PTPN13-205ENST00000502971 TIMM9Q9Y5J7 89 aa17.79■□□□□ 0.44
PTPN13-205ENST00000502971 TEX50A0A1B0GTY4 177 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 TSPAN15O95858 294 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 IGLV2-23P01705 113 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 ZFP36P26651 326 aaKnown RBP17.78■□□□□ 0.44
PTPN13-205ENST00000502971 FHITP49789 147 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 SERF2P84101 59 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 PRB3Q04118 309 aaPredicted RBP17.78■□□□□ 0.44
PTPN13-205ENST00000502971 VMA21Q3ZAQ7 101 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 RSG1Q9BU20 258 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 GGACTQ9BVM4 153 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 PLEKHA3Q9HB20 300 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 SIRT7Q9NRC8 400 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 KPTNQ9Y664 436 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 RPL8P62917 257 aaKnown RBP17.78■□□□□ 0.44
PTPN13-205ENST00000502971 ETV3LQ6ZN32 361 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 CENPVQ7Z7K6 275 aaPredicted RBP17.78■□□□□ 0.44
PTPN13-205ENST00000502971 UNKLQ9H9P5 680 aaKnown RBP17.78■□□□□ 0.44
PTPN13-205ENST00000502971 FBXO7Q9Y3I1 522 aa17.78■□□□□ 0.44
PTPN13-205ENST00000502971 RRHO14718 337 aa17.77■□□□□ 0.44
PTPN13-205ENST00000502971 HTR1DP28221 377 aa17.77■□□□□ 0.44
PTPN13-205ENST00000502971 ATP5IP56385 69 aaPredicted RBP17.77■□□□□ 0.44
PTPN13-205ENST00000502971 MOB3BQ86TA1 216 aa17.77■□□□□ 0.44
PTPN13-205ENST00000502971 SLC24A4Q8NFF2 622 aa17.77■□□□□ 0.44
PTPN13-205ENST00000502971 BPIFCQ8NFQ6 507 aa17.77■□□□□ 0.44
PTPN13-205ENST00000502971 CLDND2Q8NHS1 167 aa17.77■□□□□ 0.44
PTPN13-205ENST00000502971 COMMD5Q9GZQ3 224 aa17.77■□□□□ 0.44
PTPN13-205ENST00000502971 TET2Q6N021 2002 aaPredicted RBP17.76■□□□□ 0.43
PTPN13-205ENST00000502971 MYOD1P15172 320 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 NPY1RP25929 384 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 LMO4P61968 165 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 TPTE2P1Q5T6R2 138 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 HCP5Q6MZN7 132 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 CCDC28AQ8IWP9 274 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 HINT2Q9BX68 163 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 DPM3Q9P2X0 92 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 LRBAP50851 2863 aa17.76■□□□□ 0.43
PTPN13-205ENST00000502971 ODF3BA8MYP8 253 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 MDKP21741 143 aaPredicted RBP17.75■□□□□ 0.43
PTPN13-205ENST00000502971 CEACAM3P40198 252 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 PAX2Q02962 417 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 TEX45Q8NA69 505 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 OR1L8Q8NGR8 309 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 IGHV3-72A0A0B4J1Y9 119 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 IGHV2-70DA0A0C4DH43 119 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 PRSS46E5RG02 174 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 DLK1P80370 383 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 LFNGQ8NES3 379 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 TMEM170AQ8WVE7 144 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 RNF5Q99942 180 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 NDUFA4L2Q9NRX3 87 aa17.75■□□□□ 0.43
PTPN13-205ENST00000502971 INS-IGF2F8WCM5 200 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 IFNA4P05014 189 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 FGF7P21781 194 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 CD1BP29016 333 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 SNCAP37840 140 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 LCN2P80188 198 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 VMO1Q7Z5L0 202 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 PIMREGQ9BSJ6 248 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 BAHCC1Q9P281 2608 aa17.74■□□□□ 0.43
PTPN13-205ENST00000502971 A0A1W2PPI3 338 aa17.73■□□□□ 0.43
PTPN13-205ENST00000502971 BTBD17A6NE02 478 aa17.73■□□□□ 0.43
PTPN13-205ENST00000502971 NDUFS8O00217 210 aa17.73■□□□□ 0.43
PTPN13-205ENST00000502971 FOXH1O75593 365 aa17.73■□□□□ 0.43
PTPN13-205ENST00000502971 CA2P00918 260 aa17.73■□□□□ 0.43
PTPN13-205ENST00000502971 TUSC1Q2TAM9 212 aa17.73■□□□□ 0.43
PTPN13-205ENST00000502971 NARS2Q96I59 477 aaKnown RBP17.73■□□□□ 0.43
PTPN13-205ENST00000502971 RITA1Q96K30 269 aa17.73■□□□□ 0.43
PTPN13-205ENST00000502971 A0A1W2PN81 502 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 TMEM218A2RU14 115 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 AGPAT2O15120 278 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 SLC25A17O43808 307 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 OPN1MWP04001 364 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 H2AFB1P0C5Y9 115 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 OPN1MW2P0DN77 364 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 OPN1MW3P0DN78 364 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 CHRNA7P36544 502 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 SRSF3P84103 164 aaKnown RBP17.72■□□□□ 0.43
PTPN13-205ENST00000502971 FAM168AQ92567 244 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 SIRPDQ9H106 197 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 ZNF430Q9H8G1 570 aaPredicted RBP17.72■□□□□ 0.43
PTPN13-205ENST00000502971 TREM1Q9NP99 234 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 WDR83OSQ9Y284 106 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 DCHS2Q6V1P9 2916 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 C17orf112F2Z3M2 114 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 MPDU1O75352 247 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 UTP20O75691 2785 aaKnown RBP17.72■□□□□ 0.43
PTPN13-205ENST00000502971 DVL1P1P54792 670 aaPredicted RBP17.72■□□□□ 0.43
PTPN13-205ENST00000502971 KLRD1Q13241 179 aa17.72■□□□□ 0.43
PTPN13-205ENST00000502971 TMEM41BQ5BJD5 291 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms