RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 OR51B2Q9Y5P1 312 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 PHOX2AO14813 284 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 STAG3L2P0CL84 134 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 STAG3L3P0CL85 134 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 NPPCP23582 126 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 UBE2G2P60604 165 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 RAB31Q13636 194 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 RTL8BQ17RB0 113 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 TEPPQ6URK8 271 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 LINC00312Q9Y6C7 94 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 DMXL1Q9Y485 3027 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 MMP23AO75900 390 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 CA2P00918 260 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 NDUFB7P17568 137 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 CCL8P80075 99 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 ARSJQ5FYB0 599 aaPredicted RBP13.59□□□□□ -0.23
VCAN-204ENST00000502527 WFDC8Q8IUA0 241 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 NECAP1Q8NC96 275 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 PRSS33Q8NF86 280 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 ZNF257Q9Y2Q1 563 aa13.59□□□□□ -0.23
VCAN-204ENST00000502527 HCFC1P51610 2035 aa13.58□□□□□ -0.23
VCAN-204ENST00000502527 TMPRSS2O15393 492 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 IL6RP08887 468 aaPredicted RBP13.58□□□□□ -0.24
VCAN-204ENST00000502527 ARL14EPLP0DKL9 152 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 GNB1P62873 340 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 C4orf17Q53FE4 359 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 HIST3H2BBQ8N257 126 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 C1orf159Q96HA4 380 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 GAL3ST2Q9H3Q3 398 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 MIOXQ9UGB7 285 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 ZNF292O60281 2723 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 DSCAMO60469 2012 aa13.58□□□□□ -0.24
VCAN-204ENST00000502527 C17orf100A8MU93 164 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 FNDC10F2Z333 226 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 OR4A8P0C604 315 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 CT45A6P0DMU7 189 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 CT45A5P0DMU8 189 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 CT45A7P0DMV0 189 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 ATP5G3P48201 142 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 MEF2CQ06413 473 aaPredicted RBP13.57□□□□□ -0.24
VCAN-204ENST00000502527 ADIPOQQ15848 244 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 CISD2Q8N5K1 135 aaKnown RBP13.57□□□□□ -0.24
VCAN-204ENST00000502527 SSMEM1Q8WWF3 244 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 HINT2Q9BX68 163 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 SLC35D1Q9NTN3 355 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 DCAF16Q9NXF7 216 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 DPRXA6NFQ7 191 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 PPP5D1E7EU14 171 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 UPK2O00526 184 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 SOD3P08294 240 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 SRP14P37108 136 aaKnown RBP13.57□□□□□ -0.24
VCAN-204ENST00000502527 TDGF1P3P51864 188 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
VCAN-204ENST00000502527 NBEAQ8NFP9 2946 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 J3QR06 171 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 NDUFB4O95168 129 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 CD99P14209 185 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 RPL29P47914 159 aaKnown RBP13.56□□□□□ -0.24
VCAN-204ENST00000502527 RHOBP62745 196 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 PRCDQ00LT1 54 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 SSX8Q7RTT4 187 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 LINC01551Q86U37 167 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 OR4X1Q8NH49 305 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 SNRNP40Q96DI7 357 aaKnown RBP13.56□□□□□ -0.24
VCAN-204ENST00000502527 ABHD17AQ96GS6 310 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 GPR61Q9BZJ8 451 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 FKBP11Q9NYL4 201 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
VCAN-204ENST00000502527 PITPNC1Q9UKF7 332 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
VCAN-204ENST00000502527 ATP5IP56385 69 aaPredicted RBP13.55□□□□□ -0.24
VCAN-204ENST00000502527 GFI1BQ5VTD9 330 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 STPG3Q8N7X2 389 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 TP53TG5Q9Y2B4 290 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 IGKV1-16P04430 117 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 MYOD1P15172 320 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 FAM3BP58499 235 aaPredicted RBP13.55□□□□□ -0.24
VCAN-204ENST00000502527 RPL31P62899 125 aaKnown RBP13.55□□□□□ -0.24
VCAN-204ENST00000502527 BSPH1Q075Z2 132 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 KCNIP4Q6PIL6 250 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 OR2T10Q8NGZ9 312 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 NEUROG1Q92886 237 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 ELOVL1Q9BW60 279 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 BOD1L1Q8NFC6 3051 aa13.55□□□□□ -0.24
VCAN-204ENST00000502527 A0A1W2PPQ1 181 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 GGCTO75223 188 aaKnown RBP13.54□□□□□ -0.24
VCAN-204ENST00000502527 NBL1P41271 181 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 EFNB3Q15768 340 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 PYY3Q5JQD4 70 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 ZNF833PQ6ZTB9 187 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 OR5T1Q8NG75 326 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 OR10D4PQ8NGN7 298 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 PCGF1Q9BSM1 259 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 DSCAML1Q8TD84 2053 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
VCAN-204ENST00000502527 VSTM5A8MXK1 200 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 LINC00587B1AMM8 73 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 MT-CO2P00403 227 aa13.54□□□□□ -0.24
VCAN-204ENST00000502527 THBDP07204 575 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms