RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CLDN12P56749 244 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 BRWD1-AS2P59051 145 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 RPL8P62917 257 aaKnown RBP11.34□□□□□ -0.59
HDAC6-236ENST00000498808 MRPS15P82914 257 aaKnown RBP11.34□□□□□ -0.59
HDAC6-236ENST00000498808 PLA2G7Q13093 441 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 TMEM187Q14656 261 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 ZFP1Q6P2D0 407 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 MS4A15Q8N5U1 240 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 POM121L12Q8N7R1 296 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 RBMX2Q9Y388 322 aaKnown RBP11.34□□□□□ -0.59
HDAC6-236ENST00000498808 LRP1BQ9NZR2 4599 aa11.34□□□□□ -0.59
HDAC6-236ENST00000498808 TRAV10A0A0B4J240 114 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 IGLC7A0M8Q6 106 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 OR2T8A6NH00 312 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 UCHL1P09936 223 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 RBMY1A1P0DJD3 496 aaKnown RBP11.33□□□□□ -0.6
HDAC6-236ENST00000498808 RBMY1CP0DJD4 496 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 CRHBPP24387 322 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 TFPI2P48307 235 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 RBMY1FQ15415 496 aaKnown RBP11.33□□□□□ -0.6
HDAC6-236ENST00000498808 NR2C2APQ86WQ0 139 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 NANOGP1Q8N7R0 232 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 OR4S2Q8NH73 311 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 RNF2Q99496 336 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 C20orf24Q9BUV8 137 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 RNF126Q9BV68 326 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 SMPD3Q9NY59 655 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-236ENST00000498808 ETV7Q9Y603 341 aa11.33□□□□□ -0.6
HDAC6-236ENST00000498808 HERC1Q15751 4861 aa11.32□□□□□ -0.6
HDAC6-236ENST00000498808 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
HDAC6-236ENST00000498808 K7EMT4 169 aa11.32□□□□□ -0.6
HDAC6-236ENST00000498808 NDUFA4O00483 81 aa11.32□□□□□ -0.6
HDAC6-236ENST00000498808 HLA-GP17693 338 aa11.32□□□□□ -0.6
HDAC6-236ENST00000498808 RAB11BQ15907 218 aa11.32□□□□□ -0.6
HDAC6-236ENST00000498808 RAB3CQ96E17 227 aa11.32□□□□□ -0.6
HDAC6-236ENST00000498808 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
HDAC6-236ENST00000498808 AK6Q9Y3D8 172 aaKnown RBP11.32□□□□□ -0.6
HDAC6-236ENST00000498808 MFNGO00587 321 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 DENRO43583 198 aaKnown RBP11.31□□□□□ -0.6
HDAC6-236ENST00000498808 AMBPP02760 352 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 CD36P16671 472 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 OR2B8PP59922 312 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-236ENST00000498808 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 C2orf76Q3KRA6 126 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 LAIR2Q6ISS4 152 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 TCTEX1D2Q8WW35 142 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 FAM3DQ96BQ1 224 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 ZNF414Q96IQ9 312 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
HDAC6-236ENST00000498808 IGKV3-7A0A075B6H7 116 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 IGKV1D-13A0A0B4J2D9 117 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 TMEM272A0A1B0GTI8 110 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 C15orf61A6NNL5 157 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 F8W735 103 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-236ENST00000498808 MRPS14O60783 128 aaKnown RBP11.3□□□□□ -0.6
HDAC6-236ENST00000498808 ATP5HO75947 161 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 HLA-DQB1P01920 261 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 P0DMU3 169 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 IGKV1-13P0DP09 117 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 GNB3P16520 340 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-236ENST00000498808 Q6ZS49 121 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 AHSA2Q719I0 299 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 BSCL2Q96G97 398 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-236ENST00000498808 THYN1Q9P016 225 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 PSORS1C1Q9UIG5 152 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 SPATA2Q9UM82 520 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 OR2W1Q9Y3N9 320 aa11.3□□□□□ -0.6
HDAC6-236ENST00000498808 A0A075B6Q4 140 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 C15orf62A8K5M9 175 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 CHEK1O14757 476 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 NFYAP23511 347 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-236ENST00000498808 TIMM50Q3ZCQ8 353 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 SPSB3Q6PJ21 355 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 GPHA2Q96T91 129 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 HSD17B10Q99714 261 aaKnown RBP11.29□□□□□ -0.6
HDAC6-236ENST00000498808 RHPN1-AS1Q9BWJ2 59 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 BET1LQ9NYM9 111 aa11.29□□□□□ -0.6
HDAC6-236ENST00000498808 ELOA3CA0A087WX78 387 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-236ENST00000498808 IGHV3-49A0A0A0MS15 119 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 IGHV3-21A0A0B4J1V1 117 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 TRAV3A0A0B4J244 114 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 HRASP01112 189 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 GIG44P09565 113 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-236ENST00000498808 HIST1H1DP16402 221 aaKnown RBP11.28□□□□□ -0.6
HDAC6-236ENST00000498808 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 Q6ZR54 194 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 PQLC1Q8N2U9 271 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 MFSD4AQ8N468 514 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 GBGT1Q8N5D6 347 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 MAPKAPK5-AS1Q8N8E1 139 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 OR10W1Q8NGF6 305 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 OR10R2Q8NGX6 335 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms