RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 BTF3P20290 206 aaKnown RBP13.57□□□□□ -0.24
COL6A1-206ENST00000498614 THBS3P49746 956 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 LTC4SQ16873 150 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 ZNF718Q3SXZ3 478 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 Q6ZWC4 215 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 IGHV1-18A0A0C4DH31 117 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 SCO2A0A1W2PP80 73 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 HPRT1P00492 218 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 ARL14EPLP0DKL9 152 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 ZNF25P17030 456 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-206ENST00000498614 KITLGP21583 273 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 LINC00310P59036 64 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 YPEL3P61236 119 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-206ENST00000498614 TMEM249Q2WGJ8 235 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 TDRG1Q3Y452 100 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 IGFL2Q6UWQ7 119 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 ZNF705AQ6ZN79 300 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-206ENST00000498614 C1orf162Q8NEQ5 155 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-206ENST00000498614 RAB1CQ92928 201 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 TAAR6Q96RI8 345 aa13.57□□□□□ -0.24
COL6A1-206ENST00000498614 HEATR1Q9H583 2144 aaKnown RBP13.56□□□□□ -0.24
COL6A1-206ENST00000498614 IGHV2OR16-5A0A0B4J2B6 119 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 MARCH11A6NNE9 402 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 YPEL1O60688 119 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 OR9G9P0C7N8 305 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 CBLN1P23435 193 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 EDDM3AQ14507 147 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 OCC1Q8TAD7 63 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 LRRC29Q8WV35 223 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 PLPPR2Q96GM1 343 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 YPEL2Q96QA6 119 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 SMG1Q96Q15 3661 aaKnown RBP13.56□□□□□ -0.24
COL6A1-206ENST00000498614 SVILO95425 2214 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 SMIM21Q3B7S5 101 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 TOMM20LQ6UXN7 152 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 TMEM106BQ9NUM4 274 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 PSG11Q9UQ72 335 aa13.56□□□□□ -0.24
COL6A1-206ENST00000498614 A0A1B0GWJ7 208 aa13.55□□□□□ -0.24
COL6A1-206ENST00000498614 RRHO14718 337 aa13.55□□□□□ -0.24
COL6A1-206ENST00000498614 TNFSF13O75888 250 aa13.55□□□□□ -0.24
COL6A1-206ENST00000498614 TIMP3P35625 211 aa13.55□□□□□ -0.24
COL6A1-206ENST00000498614 CD177Q8N6Q3 437 aa13.55□□□□□ -0.24
COL6A1-206ENST00000498614 OR10G8Q8NGN5 311 aa13.55□□□□□ -0.24
COL6A1-206ENST00000498614 PLSCR4Q9NRQ2 329 aa13.55□□□□□ -0.24
COL6A1-206ENST00000498614 TPRP12270 2363 aaKnown RBP13.55□□□□□ -0.24
COL6A1-206ENST00000498614 IGLV1-44P01699 117 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 COL8A2P25067 703 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 OR2Z1Q8NG97 314 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 STARD4Q96DR4 205 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 DKK4Q9UBT3 224 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 PROCRQ9UNN8 238 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 A6NNC1 897 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 SELENOTP62341 195 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 HLA-DRB5Q30154 266 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 MIC13Q5XKP0 118 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 R3HDM4Q96D70 268 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 MGST2Q99735 147 aa13.54□□□□□ -0.24
COL6A1-206ENST00000498614 ZNF71Q9NQZ8 489 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-206ENST00000498614 SLC17A3O00476 420 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 SERF1AO75920 110 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 TPTE2P1Q5T6R2 138 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 TREML4Q6UXN2 200 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 BHLHA15Q7RTS1 189 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-206ENST00000498614 DUSP13Q9UII6 198 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 YTHDF2Q9Y5A9 579 aaKnown RBP13.53□□□□□ -0.24
COL6A1-206ENST00000498614 STAG3L2P0CL84 134 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 STAG3L3P0CL85 134 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 CDKN1AP38936 164 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 OPRK1P41145 380 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 ZNF90Q03938 601 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 MSMPQ1L6U9 139 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
COL6A1-206ENST00000498614 HSPB9Q9BQS6 159 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 MS4A5Q9H3V2 200 aa13.53□□□□□ -0.24
COL6A1-206ENST00000498614 F2Z2F3 143 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 K7EN84 100 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 K7ENP7 123 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 CEACAM4O75871 244 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 FRMD6-AS1P0C7T7 363 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 IRF2P14316 349 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 PRDX2P32119 198 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 TPPP2P59282 170 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 TEX43Q6ZNM6 134 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 TCTEX1D1Q8N7M0 179 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 HSD17B10Q99714 261 aaKnown RBP13.52□□□□□ -0.24
COL6A1-206ENST00000498614 GGTLC1Q9BX51 225 aa13.52□□□□□ -0.24
COL6A1-206ENST00000498614 MRPL18Q9H0U6 180 aaKnown RBP13.52□□□□□ -0.24
COL6A1-206ENST00000498614 SPINT2O43291 252 aa13.52□□□□□ -0.25
COL6A1-206ENST00000498614 CGAP01215 116 aa13.52□□□□□ -0.25
COL6A1-206ENST00000498614 SEM1Q6ZVN7 128 aa13.52□□□□□ -0.25
COL6A1-206ENST00000498614 C20orf144Q9BQM9 153 aa13.52□□□□□ -0.25
COL6A1-206ENST00000498614 TMEM208Q9BTX3 173 aa13.52□□□□□ -0.25
COL6A1-206ENST00000498614 IGHV3OR15-7A0A075B7D8 119 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 C15orf65H3BRN8 121 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 CXorf1O96002 111 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 RPLP1P05386 114 aaKnown RBP13.51□□□□□ -0.25
COL6A1-206ENST00000498614 CRISP2P16562 243 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 ZNF83P51522 516 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms