RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 HS3ST3B1Q9Y662 390 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 C1orf194Q5T5A4 169 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 TMEM78Q5T7P6 136 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 OR4X2Q8NGF9 303 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 TCF19Q9Y242 345 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 SLC17A3O00476 420 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 GPR183P32249 361 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 RELQ04864 619 aaPredicted RBP12.81□□□□□ -0.36
C4A-259ENST00000498271 TBR1Q16650 682 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 LRTM2Q8N967 370 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 OR4D5Q8NGN0 318 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 RTP5Q14D33 572 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 FLVCR1-AS1Q8TAF5 88 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
C4A-259ENST00000498271 IFNL4K9M1U5 179 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 TIAF1O95411 115 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 MPV17P39210 176 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 SPSB2Q99619 263 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 IGKV3D-11A0A0A0MRZ8 115 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 C2orf83Q53S99 150 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 MDP1Q86V88 176 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 C7orf71A4D174 169 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
C4A-259ENST00000498271 P2RY6Q15077 328 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 C1orf185Q5T7R7 199 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 SIGMAR1Q99720 223 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 TRBV6-7A0A0A0MS04 114 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 HIST1H1AQ02539 215 aaPredicted RBP12.8□□□□□ -0.36
C4A-259ENST00000498271 C10orf128Q5T292 105 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 Q6AWC8 147 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 FAM131CQ96AQ9 280 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 PILRBQ9UKJ0 227 aa12.8□□□□□ -0.36
C4A-259ENST00000498271 TRAV30A0A087WSZ9 112 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 IGLV3-19P01714 112 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 C18orf12Q96KH6 178 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 RTN4RQ9BZR6 473 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 ZNF525Q8N782 197 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 NDUFA2O43678 99 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 ATP5LO75964 103 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 IL6RP08887 468 aaPredicted RBP12.79□□□□□ -0.36
C4A-259ENST00000498271 SSTR5P35346 364 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 A0A1W2PRS3 328 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 J3QRE1 110 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 LTBRP36941 435 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 SEC11AP67812 179 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 DRAM1Q8N682 238 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 JMJD8Q96S16 334 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 NEU1Q99519 415 aa12.79□□□□□ -0.36
C4A-259ENST00000498271 VWA8A3KMH1 1905 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 HAX1O00165 279 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 AMBPP02760 352 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 COX6A1P12074 109 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 ID1P41134 155 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 PTGDSP41222 190 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 PCOLCEQ15113 449 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 SNAI3Q3KNW1 292 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 ZNF257Q9Y2Q1 563 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 J3QW42 95 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 CCDC144NLQ6NUI1 221 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 GNB1LQ9BYB4 327 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 MRPL16Q9NX20 251 aaKnown RBP12.78□□□□□ -0.36
C4A-259ENST00000498271 AHRRA9YTQ3 701 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 C10orf126Q8N4M7 172 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 MBD3L1Q8WWY6 194 aa12.78□□□□□ -0.36
C4A-259ENST00000498271 ANOS1P23352 680 aa12.77□□□□□ -0.36
C4A-259ENST00000498271 RND2P52198 227 aa12.77□□□□□ -0.36
C4A-259ENST00000498271 AKIRIN1Q9H9L7 192 aaPredicted RBP12.77□□□□□ -0.36
C4A-259ENST00000498271 H0YIZ8 118 aa12.77□□□□□ -0.36
C4A-259ENST00000498271 ADMP35318 185 aa12.77□□□□□ -0.36
C4A-259ENST00000498271 CIRBPQ14011 172 aaKnown RBP12.77□□□□□ -0.36
C4A-259ENST00000498271 PAPPA-AS1Q5QFB9 102 aa12.77□□□□□ -0.36
C4A-259ENST00000498271 ST20Q9HBF5 79 aa12.77□□□□□ -0.36
C4A-259ENST00000498271 CA1P00915 261 aaPredicted RBP12.77□□□□□ -0.37
C4A-259ENST00000498271 OR4A5Q8NH83 315 aa12.77□□□□□ -0.37
C4A-259ENST00000498271 ALPK2Q86TB3 2170 aa12.77□□□□□ -0.37
C4A-259ENST00000498271 H7C2G1 150 aa12.77□□□□□ -0.37
C4A-259ENST00000498271 LYPD3O95274 346 aa12.77□□□□□ -0.37
C4A-259ENST00000498271 LDLRAD2Q5SZI1 272 aa12.77□□□□□ -0.37
C4A-259ENST00000498271 SYT8Q8NBV8 401 aa12.77□□□□□ -0.37
C4A-259ENST00000498271 SSBP3Q9BWW4 388 aaPredicted RBP12.77□□□□□ -0.37
C4A-259ENST00000498271 DOCK6Q96HP0 2047 aa12.77□□□□□ -0.37
C4A-259ENST00000498271 TRAV1-1A0A0B4J248 108 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 NPIPB6E9PJ23 425 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 GDF9O60383 454 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 SNRPCP09234 159 aaKnown RBP12.76□□□□□ -0.37
C4A-259ENST00000498271 EGR1P18146 543 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 RAB9AP51151 201 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 GTF3AQ92664 365 aaKnown RBP12.76□□□□□ -0.37
C4A-259ENST00000498271 SLC25A28Q96A46 364 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 MRPS16Q9Y3D3 137 aaKnown RBP12.76□□□□□ -0.37
C4A-259ENST00000498271 LOC101059948A0A1B0GTJ6 334 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 SLC25A10Q9UBX3 287 aaPredicted RBP12.76□□□□□ -0.37
C4A-259ENST00000498271 OSTCQ9NRP0 149 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 PLXNA3P51805 1871 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 TMEM262E9PQX1 116 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 TMEM54Q969K7 222 aa12.76□□□□□ -0.37
C4A-259ENST00000498271 ODAMA1E959 279 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms