RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 FOXL1Q12952 345 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 ECSCRQ19T08 205 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 IZUMO4Q1ZYL8 232 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 THOC7Q6I9Y2 204 aaKnown RBP9.05□□□□□ -0.96
CTTN-208ENST00000498223 ZNF562Q6V9R5 426 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 LYZL2Q7Z4W2 148 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 CENPVQ7Z7K6 275 aaPredicted RBP9.05□□□□□ -0.96
CTTN-208ENST00000498223 C12orf45Q8N5I9 185 aaPredicted RBP9.05□□□□□ -0.96
CTTN-208ENST00000498223 ZNF431Q8TF32 576 aaPredicted RBP9.05□□□□□ -0.96
CTTN-208ENST00000498223 MARVELD1Q9BSK0 173 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 FAM103A1Q9BTL3 118 aaKnown RBP9.05□□□□□ -0.96
CTTN-208ENST00000498223 PDCD10Q9BUL8 212 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 C16orf95Q9H693 158 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 FKBP11Q9NYL4 201 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 SHPKQ9UHJ6 478 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 OR51B2Q9Y5P1 312 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 WSB1Q9Y6I7 421 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 A0A1B0GUS0 222 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 DUXBA0A1W2PPF3 345 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 CLPSL1A2RUU4 121 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 ATP6V0E1O15342 81 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 IFNA17P01571 189 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 APELAP0DMC3 54 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 MECP2P51608 486 aaKnown RBP9.04□□□□□ -0.96
CTTN-208ENST00000498223 TMEM267Q0VDI3 215 aaPredicted RBP9.04□□□□□ -0.96
CTTN-208ENST00000498223 C10orf55Q5SWW7 151 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 UNQ5815/PRO19632Q6UWF5 114 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 FAM219AQ8IW50 185 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 Q8N2B8 174 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 OR1S1Q8NH92 325 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 LINC01006Q8NI28 216 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 SRSF12Q8WXF0 261 aaKnown RBP9.04□□□□□ -0.96
CTTN-208ENST00000498223 LSM10Q969L4 123 aaKnown RBP9.04□□□□□ -0.96
CTTN-208ENST00000498223 GPR146Q96CH1 333 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 NOL4LQ96MY1 436 aaPredicted RBP9.04□□□□□ -0.96
CTTN-208ENST00000498223 GON7Q9BXV9 100 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 TMED3Q9Y3Q3 217 aa9.04□□□□□ -0.96
CTTN-208ENST00000498223 A0A0G2JRQ6 117 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 MSGN1A6NI15 193 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 FAM25EA8MYX2 175 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 SULT1A3P0DMM9 295 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 SULT1A4P0DMN0 295 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 MYOD1P15172 320 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 COMPP49747 757 aaPredicted RBP9.03□□□□□ -0.96
CTTN-208ENST00000498223 SLC35B1P78383 322 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 STPG2Q8N412 459 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 KLHDC1Q8N7A1 406 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 LRTM2Q8N967 370 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 MINDY2Q8NBR6 621 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 OR1L8Q8NGR8 309 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 CHPT1Q8WUD6 406 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 MITD1Q8WV92 249 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 SPIN2AQ99865 258 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 SPIN2BQ9BPZ2 258 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.03□□□□□ -0.96
CTTN-208ENST00000498223 ZNF355PQ9NSJ1 428 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 SERTAD4Q9NUC0 356 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 CACNG5Q9UF02 275 aa9.03□□□□□ -0.96
CTTN-208ENST00000498223 TRAV41A0A0B4J266 112 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 TEX50A0A1B0GTY4 177 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 C13orf42A0A1B0GVH6 325 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 TMEM89A2RUT3 159 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 PSMB11A5LHX3 300 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 C5orf51A6NDU8 294 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 C15orf61A6NNL5 157 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 G3V318 75 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 SSNA1O43805 119 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 ADAP1O75689 374 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 NXPH3O95157 252 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 TRAPPC2P0DI81 140 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 TRAPPC2BP0DI82 140 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 NDPQ00604 133 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 SMCO1Q147U7 214 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 TATDN3Q17R31 274 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 MRGPRG-AS1Q2M3A8 158 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 GGNBP1Q5YKI7 109 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 CADM3Q8N126 398 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 LFNGQ8NES3 379 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 SGMS2Q8NHU3 365 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 QTRT1Q9BXR0 403 aaKnown RBP9.02□□□□□ -0.97
CTTN-208ENST00000498223 ENY2Q9NPA8 101 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 FBXO7Q9Y3I1 522 aa9.02□□□□□ -0.97
CTTN-208ENST00000498223 A0A0B4J293 547 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 A0A1B0GU03 582 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 A0A1W2PN81 502 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 HMX3A6NHT5 357 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 SNRPGP15A8MWD9 76 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 CCSO14618 274 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 ST8SIA3O43173 380 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 IL6RP08887 468 aaPredicted RBP9.01□□□□□ -0.97
CTTN-208ENST00000498223 FGF2P09038 288 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 CHRNA7P36544 502 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 HOXA1P49639 335 aaPredicted RBP9.01□□□□□ -0.97
CTTN-208ENST00000498223 HSPE1P61604 102 aaKnown RBP9.01□□□□□ -0.97
CTTN-208ENST00000498223 OXA1LQ15070 435 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 AWAT1Q58HT5 328 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 SPINK9Q5DT21 86 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 NMSQ5H8A3 153 aa9.01□□□□□ -0.97
CTTN-208ENST00000498223 C12orf54Q6X4T0 127 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms