RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 TPSG1Q9NRR2 321 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 DPM3Q9P2X0 92 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 SPG11Q96JI7 2443 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 ABCA2Q9BZC7 2435 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 PMS2P5A8MQ11 134 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 TOX4O94842 621 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 PLA2G2AP14555 144 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 VSTM2AQ8TAG5 236 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 UNKLQ9H9P5 680 aaKnown RBP14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 ENY2Q9NPA8 101 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 ZNF257Q9Y2Q1 563 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 ANKRD34BA5PLL1 514 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 TIMM23O14925 209 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 CNTFRP26992 372 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 RPL8P62917 257 aaKnown RBP14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 VMA21Q3ZAQ7 101 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 OR10P1Q8NGE3 313 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 MED9Q9NWA0 146 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 TEX50A0A1B0GTY4 177 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 RRHO14718 337 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 OR8U8P0C7N1 319 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 USF1P22415 310 aaPredicted RBP14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 CEACAM3P40198 252 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 DVL1P1P54792 670 aaPredicted RBP14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 PRCDQ00LT1 54 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 OR2G3Q8NGZ4 309 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 TMEM167AQ8TBQ9 72 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 REG4Q9BYZ8 158 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 PLEKHA3Q9HB20 300 aa14.34□□□□□ -0.11
CHRNA4-206ENST00000498043 CENPEQ02224 2701 aa14.33□□□□□ -0.11
CHRNA4-206ENST00000498043 MFSD2BA6NFX1 497 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 LY86O95711 162 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 AANATQ16613 207 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 PXDC1Q5TGL8 231 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 Q6ZRG5 221 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 PINX1Q96BK5 328 aaKnown RBP14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 TBX15Q96SF7 602 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 COMMD5Q9GZQ3 224 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 ZNF430Q9H8G1 570 aaPredicted RBP14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 FKBP11Q9NYL4 201 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 MED13LQ71F56 2210 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 USP9YO00507 2555 aaPredicted RBP14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 WNK2Q9Y3S1 2297 aa14.33□□□□□ -0.12
CHRNA4-206ENST00000498043 TNCP24821 2201 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 LGALS7P47929 136 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 FHITP49789 147 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 KRTAP10-9P60411 292 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 RPP30P78346 268 aaKnown RBP14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 C10orf55Q5SWW7 151 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 THNSL2Q86YJ6 484 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 SLC24A4Q8NFF2 622 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 OR5B3Q8NH48 314 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 OR4A5Q8NH83 315 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 SCGB1C1Q8TD33 95 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 TMEM170AQ8WVE7 144 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 GNPNAT1Q96EK6 184 aaPredicted RBP14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 RSG1Q9BU20 258 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 PRH1P02810 166 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 PJVKQ0ZLH3 352 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 HNF4GQ14541 408 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 C17orf50Q8WW18 174 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 SAT2Q96F10 170 aaPredicted RBP14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 TMEM147Q9BVK8 224 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 SVEP1Q4LDE5 3571 aa14.32□□□□□ -0.12
CHRNA4-206ENST00000498043 I3L521 148 aa14.31□□□□□ -0.12
CHRNA4-206ENST00000498043 SSX2Q16385 188 aa14.31□□□□□ -0.12
CHRNA4-206ENST00000498043 OR10W1Q8NGF6 305 aa14.31□□□□□ -0.12
CHRNA4-206ENST00000498043 WDR61Q9GZS3 305 aaKnown RBP14.31□□□□□ -0.12
CHRNA4-206ENST00000498043 HRH4Q9H3N8 390 aa14.31□□□□□ -0.12
CHRNA4-206ENST00000498043 UQCC1Q9NVA1 299 aa14.31□□□□□ -0.12
CHRNA4-206ENST00000498043 J3QKU1 62 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 VENTXO95231 258 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 NPY1RP25929 384 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 LGALS4P56470 323 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 ZNF616Q08AN1 781 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 LRRC75BQ2VPJ9 315 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 ETV3LQ6ZN32 361 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 CFHR4Q92496 578 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 FBXO7Q9Y3I1 522 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 E7EUB6 86 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 CA2P00918 260 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 IFNA4P05014 189 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 PAX1P15863 534 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 CD24P25063 80 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 CAMLGP49069 296 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 PSG5Q15238 335 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 TOR2AQ5JU69 321 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 DYNAPQ8N1N2 210 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 OR1L8Q8NGR8 309 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 FAM210AQ96ND0 272 aa14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 ANKRD17O75179 2603 aaKnown RBP14.3□□□□□ -0.12
CHRNA4-206ENST00000498043 MAP1AP78559 2803 aaPredicted RBP14.29□□□□□ -0.12
CHRNA4-206ENST00000498043 RAB11AP62491 216 aa14.29□□□□□ -0.12
CHRNA4-206ENST00000498043 ATP6V1FQ16864 119 aa14.29□□□□□ -0.12
CHRNA4-206ENST00000498043 CLEC12BQ2HXU8 276 aa14.29□□□□□ -0.12
CHRNA4-206ENST00000498043 MRGPRG-AS1Q2M3A8 158 aa14.29□□□□□ -0.12
CHRNA4-206ENST00000498043 FAM213BQ8TBF2 198 aa14.29□□□□□ -0.12
CHRNA4-206ENST00000498043 TAF15Q92804 592 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHRNA4-206ENST00000498043 PARP11Q9NR21 331 aa14.29□□□□□ -0.12
CHRNA4-206ENST00000498043 NDUFA4L2Q9NRX3 87 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms