RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 MRPL30Q8TCC3 161 aaKnown RBP1.75□□□□□ -2.13
RIF1-212ENST00000498041 KLF14Q8TD94 323 aaPredicted RBP1.75□□□□□ -2.13
RIF1-212ENST00000498041 GPX8Q8TED1 209 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 CHCHD10Q8WYQ3 142 aaPredicted RBP1.75□□□□□ -2.13
RIF1-212ENST00000498041 OR5P3Q8WZ94 311 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 AQP3Q92482 292 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 CPNE4Q96A23 557 aaPredicted RBP1.75□□□□□ -2.13
RIF1-212ENST00000498041 RPUSD4Q96CM3 377 aaKnown RBP1.75□□□□□ -2.13
RIF1-212ENST00000498041 PIK3IP1Q96FE7 263 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 COQ2Q96H96 371 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 ABHD14BQ96IU4 210 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 OR10C1Q96KK4 312 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 TBX15Q96SF7 602 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 GPER1Q99527 375 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 SUCNR1Q9BXA5 334 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 LINC00470Q9BZP3 86 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 FXYD6Q9H0Q3 95 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 CST11Q9H112 138 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 PPA2Q9H2U2 334 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 OR51I2Q9H344 312 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 PATZ1Q9HBE1 687 aaKnown RBP1.75□□□□□ -2.13
RIF1-212ENST00000498041 TMEM165Q9HC07 324 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 WFDC1Q9HC57 220 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 NEK6Q9HC98 313 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 VCX3AQ9NNX9 186 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 NUDT15Q9NV35 164 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 MCUBQ9NWR8 336 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 TAAR3PQ9P1P4 343 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 KIF25Q9UIL4 384 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 BLOC1S6Q9UL45 172 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 HHLA2Q9UM44 414 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 PEX16Q9Y5Y5 336 aa1.75□□□□□ -2.13
RIF1-212ENST00000498041 MGAQ8IWI9 3026 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 HYDINQ4G0P3 5121 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 APC2O95996 2303 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 PTPRQQ9UMZ3 2332 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 ABCA4P78363 2273 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 RIF1Q5UIP0 2472 aaKnown RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 IGKV2D-24A0A075B6R9 120 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 IGKV1D-17A0A075B6S4 117 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 IGHV3OR16-13A0A075B7E8 117 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 ANKRD20A5PA0PJZ0 165 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 LRP5LA4QPB2 252 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 RFPL4AA6NLU0 287 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 TMEM212A6NML5 194 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 C17orf98A8MV24 154 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 E7EUB6 86 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 RFPL4AL1F8VTS6 287 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 AIPO00170 330 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 FABP7O15540 132 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 SULT1B1O43704 296 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 EIF1BO60739 113 aaKnown RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 NOL3O60936 208 aaKnown RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 NOS1APO75052 506 aaPredicted RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 DHRS3O75911 302 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 OR2H2O95918 312 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 IGKV1-39P01597 117 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 C1QBP02746 253 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 OPN1MWP04001 364 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 IGKV1D-39P04432 117 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 ERCC1P07992 297 aaPredicted RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 TACSTD2P09758 323 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 OPN1MW2P0DN77 364 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 OPN1MW3P0DN78 364 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 GTF2F2P13984 249 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 GABRA1P14867 456 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 AKR1C4P17516 323 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 PRKACAP17612 351 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 RAB3AP20336 220 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 COX5AP20674 150 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 CNTFRP26992 372 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 HRH1P35367 487 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 GABRA2P47869 451 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 EIF2B2P49770 351 aaKnown RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 RAB13P51153 203 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 H2BFSP57053 126 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 LINC00315P59091 139 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 HERVK_113P61574 105 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 PPP3R1P63098 170 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 SUPT4H1P63272 117 aaKnown RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 TGFBR3Q03167 851 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 TFF3Q07654 80 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 KLRD1Q13241 179 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 SNTB2Q13425 540 aaKnown RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 PPP1R1AQ13522 171 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 EDDM3AQ14507 147 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 OR8B8Q15620 311 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 BCL2A1Q16548 175 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 TATDN3Q17R31 274 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 RGS21Q2M5E4 152 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 CCDC58Q4VC31 144 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 RPL39P5Q59GN2 51 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 TMEM41BQ5BJD5 291 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 UBE2NLQ5JXB2 153 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 TMEM69Q5SWH9 247 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 TMEM244Q5VVB8 128 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 ZNF660Q6AZW8 331 aaPredicted RBP1.74□□□□□ -2.13
RIF1-212ENST00000498041 OR2A2Q6IF42 318 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 C11orf71Q6IPW1 123 aa1.74□□□□□ -2.13
RIF1-212ENST00000498041 WDR82Q6UXN9 313 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms