RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 DISC1C4P0D8 188 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 IL6RP08887 468 aaPredicted RBP8.73□□□□□ -1.01
ERCC8-208ENST00000497892 PGAM2P15259 253 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 PI3P19957 117 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 CD40LGP29965 261 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 MYCNOSP40205 109 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 TPPP2P59282 170 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 RPL8P62917 257 aaKnown RBP8.73□□□□□ -1.01
ERCC8-208ENST00000497892 RUNX1Q01196 453 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 FHL3Q13643 280 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 ZNF585BQ52M93 769 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 SPANXN2Q5MJ10 180 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 MRPL41Q8IXM3 137 aaKnown RBP8.73□□□□□ -1.01
ERCC8-208ENST00000497892 Q8N402 240 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 OR6Q1Q8NGQ2 317 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 OR13C8Q8NGS7 320 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 RAX2Q96IS3 184 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 PHB2Q99623 299 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 PRRT1Q99946 306 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 THAP7Q9BT49 309 aaPredicted RBP8.73□□□□□ -1.01
ERCC8-208ENST00000497892 TMEM140Q9NV12 185 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 SLC2A8Q9NY64 477 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 VSIG4Q9Y279 399 aa8.73□□□□□ -1.01
ERCC8-208ENST00000497892 TEX22C9J3V5 150 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 I3L521 148 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 CCL24O00175 119 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 MPPED1O15442 326 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 OR9G9P0C7N8 305 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 APELAP0DMC3 54 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 HLA-GP17693 338 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 ECI1P42126 302 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 LPAR6P43657 344 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 RPL27AP46776 148 aaKnown RBP8.72□□□□□ -1.01
ERCC8-208ENST00000497892 PIGPP57054 158 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 ERVK-16P61578 105 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 SURF2Q15527 256 aaPredicted RBP8.72□□□□□ -1.01
ERCC8-208ENST00000497892 PYDC2Q56P42 97 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 CADM3Q8N126 398 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 ADAD2Q8NCV1 583 aaKnown RBP8.72□□□□□ -1.01
ERCC8-208ENST00000497892 DMBX1Q8NFW5 382 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 OR5T1Q8NG75 326 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 OR51S1Q8NGJ8 323 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 ZFAND1Q8TCF1 268 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 MARCH1Q8TCQ1 289 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 MS4A10Q96PG2 267 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 DUX3Q96PT4 197 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 HRASLSQ9HDD0 168 aa8.72□□□□□ -1.01
ERCC8-208ENST00000497892 TRAV3A0A0B4J244 114 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 A0A1B0GW64 132 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 G3V4G9 280 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 H0Y980 276 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 UPK2O00526 184 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 KRASP01116 189 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 TRGV3P03979 118 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 CTSDP07339 412 aaPredicted RBP8.71□□□□□ -1.02
ERCC8-208ENST00000497892 LGALS1P09382 135 aaKnown RBP8.71□□□□□ -1.02
ERCC8-208ENST00000497892 RPA2P15927 270 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 KLF9Q13886 244 aaPredicted RBP8.71□□□□□ -1.02
ERCC8-208ENST00000497892 KPRPQ5T749 579 aaPredicted RBP8.71□□□□□ -1.02
ERCC8-208ENST00000497892 CCDC71LQ8N9Z2 235 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 OR5B12Q96R08 314 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 KRTAP9-9Q9BYP9 154 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 KRTAP9-4Q9BYQ2 154 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 SRRQ9GZT4 340 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 COA4Q9NYJ1 87 aa8.71□□□□□ -1.02
ERCC8-208ENST00000497892 CGB1A6NKQ9 187 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 E7EUB6 86 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 IGKV1-39P01597 117 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 IGKV1D-39P04432 117 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 MYOD1P15172 320 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 G6PCP35575 357 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 AP3S2P59780 193 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 OR2B8PP59922 312 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 BEAN1Q3B7T3 259 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 C1QL4Q86Z23 238 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 TTC9CQ8N5M4 171 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 OR11H1Q8NG94 326 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 DEDD2Q8WXF8 326 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 RCC1LQ96I51 464 aaKnown RBP8.7□□□□□ -1.02
ERCC8-208ENST00000497892 SEC22AQ96IW7 307 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 FYTTD1Q96QD9 318 aaKnown RBP8.7□□□□□ -1.02
ERCC8-208ENST00000497892 TP53RKQ96S44 253 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 COMMD5Q9GZQ3 224 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 C5orf66Q9H5L9 145 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 ZNF355PQ9NSJ1 428 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 MCUBQ9NWR8 336 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 COPZ2Q9P299 210 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 SCP2D1Q9UJQ7 156 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 C14orf166Q9Y224 244 aaKnown RBP8.7□□□□□ -1.02
ERCC8-208ENST00000497892 ZNF257Q9Y2Q1 563 aa8.7□□□□□ -1.02
ERCC8-208ENST00000497892 A0A0G2JLM5 398 aa8.69□□□□□ -1.02
ERCC8-208ENST00000497892 C3orf85A0A1B0GTC6 90 aa8.69□□□□□ -1.02
ERCC8-208ENST00000497892 IGLC7A0M8Q6 106 aa8.69□□□□□ -1.02
ERCC8-208ENST00000497892 HMX3A6NHT5 357 aa8.69□□□□□ -1.02
ERCC8-208ENST00000497892 NPIPB5A8MRT5 1133 aa8.69□□□□□ -1.02
ERCC8-208ENST00000497892 EIF4EBP3O60516 100 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-208ENST00000497892 B3GALNT1O75752 331 aa8.69□□□□□ -1.02
ERCC8-208ENST00000497892 DUS4LO95620 317 aaKnown RBP8.69□□□□□ -1.02
ERCC8-208ENST00000497892 IGHV3-11P01762 117 aa8.69□□□□□ -1.02
ERCC8-208ENST00000497892 SERPINE2P07093 398 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms