RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.66□□□□□ -0.7
GARNL3-220ENST00000496711 TMEM250H0YL14 139 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 UPK2O00526 184 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 APOA2P02652 100 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 IGKV1-16P04430 117 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 IL6RP08887 468 aaPredicted RBP10.66□□□□□ -0.7
GARNL3-220ENST00000496711 APOBEC3AP31941 199 aaPredicted RBP10.66□□□□□ -0.7
GARNL3-220ENST00000496711 CA7P43166 264 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 ERVFRD-1P60508 538 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 IQCF2Q8IXL9 164 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 RAB1CQ92928 201 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 MGST2Q99735 147 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 GGTLC1Q9BX51 225 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 MRPL20Q9BYC9 149 aaKnown RBP10.66□□□□□ -0.7
GARNL3-220ENST00000496711 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 ROS1P08922 2347 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 POLEQ07864 2286 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 PKDREJQ9NTG1 2253 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 NBEAQ8NFP9 2946 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 B9A039 149 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 DEFA4P12838 97 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 PRCDQ00LT1 54 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 WDR25Q64LD2 544 aaPredicted RBP10.66□□□□□ -0.7
GARNL3-220ENST00000496711 PLEKHA3Q9HB20 300 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 BET1LQ9NYM9 111 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 KAAG1Q9UBP8 84 aa10.66□□□□□ -0.7
GARNL3-220ENST00000496711 DCHS1Q96JQ0 3298 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 IGHV1-69-2A0A0G2JMI3 117 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 FAM90A27PA6NNH2 459 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 DVL1O14640 695 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 CA2P00918 260 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 SAA1P0DJI8 122 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-220ENST00000496711 MYOD1P15172 320 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 LOXP28300 417 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-220ENST00000496711 AKR1D1P51857 326 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 NHLH1Q02575 133 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 ELOBQ15370 118 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 FBXL19-AS1Q494R0 122 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 FAM71F2Q6NXP2 309 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 CYP2G1PQ6ZSU1 146 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 C8orf31Q8N9H6 132 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 OSR1Q8TAX0 266 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-220ENST00000496711 SMIM7Q9BQ49 75 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 HINT2Q9BX68 163 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 NPVFQ9HCQ7 196 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 NAT8Q9UHE5 227 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 RAXQ9Y2V3 346 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
GARNL3-220ENST00000496711 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
GARNL3-220ENST00000496711 J3QR06 171 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 KBTBD11O94819 623 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 YIF1AO95070 293 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 S100A6P06703 90 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 TMEM249Q2WGJ8 235 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 ARSJQ5FYB0 599 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-220ENST00000496711 GCSAMLQ5JQS6 135 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 ZNF343Q6P1L6 599 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 C1QL4Q86Z23 238 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 LINC00518Q8N0U6 118 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 OR4F5Q8NH21 305 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 Q8WTZ3 238 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 GATAD1Q8WUU5 269 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 OR4F4Q96R69 305 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 FKBP11Q9NYL4 201 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 A0A1W2PPV4 95 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 SRRM4A7MD48 611 aaKnown RBP10.64□□□□□ -0.71
GARNL3-220ENST00000496711 FNDC10F2Z333 226 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 H0YJW9 148 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 CHRNB4P30926 498 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 RPL35P42766 123 aaKnown RBP10.64□□□□□ -0.71
GARNL3-220ENST00000496711 KLRB1Q12918 225 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 MIC13Q5XKP0 118 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 LINC00311Q8N616 119 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 OR10X1Q8NGY0 326 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 ZNF596Q8TC21 504 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 HARBI1Q96MB7 349 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 TMEM242Q9NWH2 141 aa10.64□□□□□ -0.71
GARNL3-220ENST00000496711 PAGE4O60829 102 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 DLX6P56179 175 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 SNRPEP62304 92 aaKnown RBP10.63□□□□□ -0.71
GARNL3-220ENST00000496711 ZNF674Q2M3X9 581 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 TMEM155Q4W5P6 130 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 TMEM177Q53S58 311 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 TEPPQ6URK8 271 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 ST6GALNAC3Q8NDV1 305 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 OR5AN1Q8NGI8 311 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 OR5B3Q8NH48 314 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 TMEM186Q96B77 213 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 RPUSD4Q96CM3 377 aaKnown RBP10.63□□□□□ -0.71
GARNL3-220ENST00000496711 NEIL1Q96FI4 390 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-220ENST00000496711 PARLQ9H300 379 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 PATZ1Q9HBE1 687 aaKnown RBP10.63□□□□□ -0.71
GARNL3-220ENST00000496711 URGCP-MRPS24S4R325 110 aa10.63□□□□□ -0.71
GARNL3-220ENST00000496711 TNCP24821 2201 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 A0A087X0M5 115 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 TEX50A0A1B0GTY4 177 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 A0A1B0GX30 115 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 CLDN34H7C241 214 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms