RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 OR4C12Q96R67 309 aa11.09□□□□□ -0.63
PDAP1-204ENST00000496335 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
PDAP1-204ENST00000496335 ZNF257Q9Y2Q1 563 aa11.09□□□□□ -0.63
PDAP1-204ENST00000496335 LSM4Q9Y4Z0 139 aaKnown RBP11.09□□□□□ -0.63
PDAP1-204ENST00000496335 NPIPB5A8MRT5 1133 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 SPNP16150 400 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 SYNJ2BPP57105 145 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 OR2B8PP59922 312 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 VAX1Q5SQQ9 334 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 NECAP1Q8NC96 275 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 RAB2BQ8WUD1 216 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 RSRP1Q9BUV0 290 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 COMMD9Q9P000 198 aa11.08□□□□□ -0.64
PDAP1-204ENST00000496335 MARCH11A6NNE9 402 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 NDUFB8O95169 186 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 KRASP01116 189 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 CD3DP04234 171 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 CRYGCP07315 174 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 PSMB6P28072 239 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 G6PCP35575 357 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 RPL5P46777 297 aaKnown RBP11.07□□□□□ -0.64
PDAP1-204ENST00000496335 TMBIM6P55061 237 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 CD69Q07108 199 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 C15orf32Q32M92 178 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 LPCAT3Q6P1A2 487 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 DYNC2LI1Q8TCX1 351 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 FANCD2OSQ96PS1 177 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 ELOVL1Q9BW60 279 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 COMMD5Q9GZQ3 224 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 MTFP1Q9UDX5 166 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 FBXL7Q9UJT9 491 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 S4R3C0 116 aa11.07□□□□□ -0.64
PDAP1-204ENST00000496335 BMPR1BO00238 502 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 IFNA6P05013 189 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 CTRB1P17538 263 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 UCP3P55916 312 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 ERVK-16P61578 105 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 DCTN2Q13561 401 aaKnown RBP11.06□□□□□ -0.64
PDAP1-204ENST00000496335 RNASE10Q5GAN6 216 aaKnown RBP11.06□□□□□ -0.64
PDAP1-204ENST00000496335 CTRB2Q6GPI1 263 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 C11orf87Q6NUJ2 197 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 IL34Q6ZMJ4 242 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 TBC1D26Q86UD7 250 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 OR10W1Q8NGF6 305 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 OR9G4Q8NGQ1 327 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 OR6Q1Q8NGQ2 317 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 NSG2Q9Y328 171 aa11.06□□□□□ -0.64
PDAP1-204ENST00000496335 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.05□□□□□ -0.64
PDAP1-204ENST00000496335 TEX50A0A1B0GTY4 177 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 IGLC7A0M8Q6 106 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 PPP5D1E7EU14 171 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 TPPPO94811 219 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 HLA-AP01891 365 aaKnown RBP11.05□□□□□ -0.64
PDAP1-204ENST00000496335 PI3P19957 117 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 SLC38A6Q8IZM9 456 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 OR4D10Q8NGI6 311 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 C15orf40Q8WUR7 153 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 BCL7BQ9BQE9 202 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
PDAP1-204ENST00000496335 CCDC59Q9P031 241 aaKnown RBP11.05□□□□□ -0.64
PDAP1-204ENST00000496335 DMRT1Q9Y5R6 373 aa11.05□□□□□ -0.64
PDAP1-204ENST00000496335 H3BMQ9 156 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 GABARAPH6UMI1 98 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 DHFRP00374 187 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 IGKV1-39P01597 117 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 IGLV1-51P01701 117 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 IGKV1D-39P04432 117 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 CSN3P07498 182 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 DEFA4P12838 97 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 GP9P14770 177 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 PGAM2P15259 253 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 S100GP29377 79 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 DIRAS2Q96HU8 199 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 CCDC140Q96MF4 163 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 HINT2Q9BX68 163 aa11.04□□□□□ -0.64
PDAP1-204ENST00000496335 IGLV11-55A0A075B6I3 123 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 DBX1A6NMT0 343 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 NOL3O60936 208 aaKnown RBP11.03□□□□□ -0.64
PDAP1-204ENST00000496335 RAB3DO95716 219 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 CD74P04233 296 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 FGF2P09038 288 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 TRAPPC2P0DI81 140 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 TRAPPC2BP0DI82 140 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 PPP5CP53041 499 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 TAS2R19P59542 299 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 WT1-ASQ06250 92 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 TATDN3Q17R31 274 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 KLK9Q2XQG4 91 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 LHFPL1Q86WI0 220 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 ARRDC1Q8N5I2 433 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 TMEM229BQ8NBD8 167 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 OR1L8Q8NGR8 309 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 ISOC1Q96CN7 298 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 C6orf62Q9GZU0 229 aaPredicted RBP11.03□□□□□ -0.64
PDAP1-204ENST00000496335 KLK9Q9UKQ9 250 aa11.03□□□□□ -0.64
PDAP1-204ENST00000496335 OR51B2Q9Y5P1 312 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms