RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CEP250Q9BV73 2442 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 C11orf94C9JXX5 98 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 PDE6DO43924 150 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 CT45A6P0DMU7 189 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 CT45A5P0DMU8 189 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 CT45A7P0DMV0 189 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 BSXQ3C1V8 233 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 TEPPQ6URK8 271 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 GATAD1Q8WUU5 269 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 RND1Q92730 232 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 SNRNP40Q96DI7 357 aaKnown RBP9.08□□□□□ -0.96
CMSS1-208ENST00000496116 FAM210BQ96KR6 192 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 ZNF714Q96N38 554 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 MGST2Q99735 147 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 LRFN3Q9BTN0 628 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 GGTLC1Q9BX51 225 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 PLEKHA3Q9HB20 300 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 FKBP11Q9NYL4 201 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 PXMP4Q9Y6I8 212 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 ACACAQ13085 2346 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 GVINP1Q7Z2Y8 2422 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 TMEM178BH3BS89 294 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 J3QR06 171 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 K7ENP7 123 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 DEFA4P12838 97 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 S100A12P80511 92 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 ASCL5Q7RTU5 278 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 NANPQ8TBE9 248 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 TMEM170AQ8WVE7 144 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 CCL17Q92583 94 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 TXNDC17Q9BRA2 123 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 LSM4Q9Y4Z0 139 aaKnown RBP9.07□□□□□ -0.96
CMSS1-208ENST00000496116 TRBV24-1A0A075B6N3 115 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 FNDC10F2Z333 226 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 UPK2O00526 184 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 NDUFB3O43676 98 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 VENTXO95231 258 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 CA2P00918 260 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 APOA2P02652 100 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 PLA2G5P39877 138 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 ATP5IP56385 69 aaPredicted RBP9.07□□□□□ -0.96
CMSS1-208ENST00000496116 B2MP61769 119 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 RPL23P62829 140 aaKnown RBP9.07□□□□□ -0.96
CMSS1-208ENST00000496116 PRCDQ00LT1 54 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 LRRC10Q5BKY1 277 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 GCSAMLQ5JQS6 135 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 MIC13Q5XKP0 118 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 ZNF833PQ6ZTB9 187 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 ZCCHC24Q8N2G6 241 aaKnown RBP9.07□□□□□ -0.96
CMSS1-208ENST00000496116 HINT2Q9BX68 163 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 PATZ1Q9HBE1 687 aaKnown RBP9.07□□□□□ -0.96
CMSS1-208ENST00000496116 TMEM106BQ9NUM4 274 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 BET1LQ9NYM9 111 aa9.07□□□□□ -0.96
CMSS1-208ENST00000496116 YIF1AO95070 293 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 CXorf1O96002 111 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 IGKV1-16P04430 117 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 IL6RP08887 468 aaPredicted RBP9.06□□□□□ -0.96
CMSS1-208ENST00000496116 STAG3L2P0CL84 134 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 STAG3L3P0CL85 134 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 S100PP25815 95 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 ARSJQ5FYB0 599 aaPredicted RBP9.06□□□□□ -0.96
CMSS1-208ENST00000496116 PIP4P2Q8N4L2 257 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 OR5B3Q8NH48 314 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 OSR1Q8TAX0 266 aaPredicted RBP9.06□□□□□ -0.96
CMSS1-208ENST00000496116 RNASE6Q93091 150 aaKnown RBP9.06□□□□□ -0.96
CMSS1-208ENST00000496116 ANAPC16Q96DE5 110 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 WFIKKN1Q96NZ8 548 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 OR5B12Q96R08 314 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 SCNM1Q9BWG6 230 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 DYNLRB1Q9NP97 96 aa9.06□□□□□ -0.96
CMSS1-208ENST00000496116 MAP1BP46821 2468 aaKnown RBP9.06□□□□□ -0.96
CMSS1-208ENST00000496116 F6UZH7 168 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 HAX1O00165 279 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 TRGC2P03986 189 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 CST9LP1Q5W188 147 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 C16orf82Q7Z2V1 217 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 H1FXQ92522 213 aaKnown RBP9.05□□□□□ -0.96
CMSS1-208ENST00000496116 MUC6Q6W4X9 2439 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 ANKRD11Q6UB99 2663 aaPredicted RBP9.05□□□□□ -0.96
CMSS1-208ENST00000496116 H7BYZ3 331 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 ARL14EPLP0DKL9 152 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 CCL3L1P16619 93 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 RPL29P47914 159 aaKnown RBP9.05□□□□□ -0.96
CMSS1-208ENST00000496116 RHOBP62745 196 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 TMEM200BQ69YZ2 307 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 SPNS3Q6ZMD2 512 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 STPG3Q8N7X2 389 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 SSMEM1Q8WWF3 244 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 VKORC1Q9BQB6 163 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 DOK5Q9P104 306 aa9.05□□□□□ -0.96
CMSS1-208ENST00000496116 SRRM4A7MD48 611 aaKnown RBP9.04□□□□□ -0.96
CMSS1-208ENST00000496116 MT-CO2P00403 227 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 SAA1P0DJI8 122 aaPredicted RBP9.04□□□□□ -0.96
CMSS1-208ENST00000496116 HOXA5P20719 270 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 NDUFA6P56556 154 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 UBE2G2P60604 165 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 PRR30Q53SZ7 412 aaPredicted RBP9.04□□□□□ -0.96
CMSS1-208ENST00000496116 NCMAPQ5T1S8 102 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
CMSS1-208ENST00000496116 OR10X1Q8NGY0 326 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms