RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 SULT1C2O00338 296 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 REG1AP05451 166 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 FCER2P06734 321 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 MYOD1P15172 320 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 CTRB1P17538 263 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 FXYD4P59646 89 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 CATR1Q13166 79 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 TIMM50Q3ZCQ8 353 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 FAM106AQ4KMX7 169 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 CTRB2Q6GPI1 263 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 LINC00322Q6ZN03 302 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 WDR89Q96FK6 387 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 HIPK2Q9H2X6 1198 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 ZC4H2Q9NQZ6 224 aa13.89□□□□□ -0.19
CLCNKA-207ENST00000495784 RBFOX2O43251 390 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 CBLN1P23435 193 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 SLC16A13Q7RTY0 426 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 CACNG8Q8WXS5 425 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 CXorf58Q96LI9 332 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 FAM110AQ9BQ89 295 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 WFDC10AQ9H1F0 79 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 AUNIPQ9H7T9 357 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 SRD5A3Q9H8P0 318 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 STARD9Q9P2P6 4700 aa13.88□□□□□ -0.19
CLCNKA-207ENST00000495784 RBMY1BA6NDE4 496 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-207ENST00000495784 RBMY1EA6NEQ0 496 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-207ENST00000495784 RBMY1DP0C7P1 496 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-207ENST00000495784 CBX5P45973 191 aa13.87□□□□□ -0.19
CLCNKA-207ENST00000495784 TAS2R31P59538 309 aa13.87□□□□□ -0.19
CLCNKA-207ENST00000495784 NEDD8Q15843 81 aa13.87□□□□□ -0.19
CLCNKA-207ENST00000495784 COMMD5Q9GZQ3 224 aa13.87□□□□□ -0.19
CLCNKA-207ENST00000495784 SELENOKQ9Y6D0 94 aa13.87□□□□□ -0.19
CLCNKA-207ENST00000495784 IGLV11-55A0A075B6I3 123 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 TRBV7-1A0A0A6YYK4 115 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 TMEM213A2RRL7 107 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 HPRT1P00492 218 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 CLEC3BP05452 202 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 NQO2P16083 231 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 OR2B8PP59922 312 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 HERV-K104P61576 105 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 KLK9Q2XQG4 91 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 ZNF57Q68EA5 555 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 TMEM17Q86X19 198 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 DMBX1Q8NFW5 382 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 OR5AP2Q8NGF4 316 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 OR51H1Q8NH63 302 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 IL17DQ8TAD2 202 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 KLK9Q9UKQ9 250 aa13.86□□□□□ -0.19
CLCNKA-207ENST00000495784 MFSD2BA6NFX1 497 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 CGB1A6NKQ9 187 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 A8MWP6 167 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 UPK2O00526 184 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 POU2AF1Q16633 256 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 AADACL3Q5VUY0 350 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 TMEM61Q8N0U2 210 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 UXS1Q8NBZ7 420 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 CD300LFQ8TDQ1 290 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 GIMAP1Q8WWP7 306 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 BORCS5Q969J3 196 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 IFT46Q9NQC8 304 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 TMEM140Q9NV12 185 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 THYN1Q9P016 225 aa13.85□□□□□ -0.19
CLCNKA-207ENST00000495784 TRAV3A0A0B4J244 114 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 IGLC7A0M8Q6 106 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 MEIS3P1A6NDR6 274 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 CYB5BO43169 146 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 TMEM127O75204 238 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 GPR183P32249 361 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 ZNF818PQ6ZRF7 136 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 OR52B4Q8NGK2 314 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 PLEKHA2Q9HB19 425 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 MLXQ9UH92 298 aa13.84□□□□□ -0.19
CLCNKA-207ENST00000495784 CSMD3Q7Z407 3707 aa13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 SCAF4O95104 1147 aaKnown RBP13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 S1PR2O95136 353 aa13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 ERVK-16P61578 105 aa13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 ANKRD55Q3KP44 614 aa13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 S100A16Q96FQ6 103 aaKnown RBP13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 QTRT1Q9BXR0 403 aaKnown RBP13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 EHFQ9NZC4 300 aa13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 COMMD9Q9P000 198 aa13.83□□□□□ -0.2
CLCNKA-207ENST00000495784 XRCC3O43542 346 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 FGF2P09038 288 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 RPA2P15927 270 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 TM4SF20Q53R12 229 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 THOC7Q6I9Y2 204 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 PLET1Q6UQ28 207 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 BTNL8Q6UX41 500 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 UNQ9165/PRO28630Q6UXU0 137 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 CROCCP3Q8IVE0 287 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 ZNF502Q8TBZ5 544 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 MARC2Q969Z3 335 aa13.82□□□□□ -0.2
CLCNKA-207ENST00000495784 DNAH1Q9P2D7 4330 aa13.81□□□□□ -0.2
CLCNKA-207ENST00000495784 IGHV3-35A0A0C4DH35 117 aa13.81□□□□□ -0.2
CLCNKA-207ENST00000495784 JTBO76095 146 aa13.81□□□□□ -0.2
CLCNKA-207ENST00000495784 PTBP1P26599 531 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLCNKA-207ENST00000495784 GNRHRP30968 328 aa13.81□□□□□ -0.2
CLCNKA-207ENST00000495784 KCTD21Q4G0X4 260 aa13.81□□□□□ -0.2
CLCNKA-207ENST00000495784 RBPMS2Q6ZRY4 209 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms