RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 ALX4Q9H161 411 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-218ENST00000495588 NAA60Q9H7X0 242 aa4.4□□□□□ -1.71
GAPVD1-218ENST00000495588 PIPOXQ9P0Z9 390 aa4.4□□□□□ -1.71
GAPVD1-218ENST00000495588 GAB2Q9UQC2 676 aa4.4□□□□□ -1.71
GAPVD1-218ENST00000495588 WNK2Q9Y3S1 2297 aa4.4□□□□□ -1.71
GAPVD1-218ENST00000495588 CSMD1Q96PZ7 3565 aa4.4□□□□□ -1.71
GAPVD1-218ENST00000495588 ABCA12Q86UK0 2595 aa4.4□□□□□ -1.71
GAPVD1-218ENST00000495588 PDZD2O15018 2839 aa4.4□□□□□ -1.71
GAPVD1-218ENST00000495588 NAV2Q8IVL1 2488 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 VPS13CQ709C8 3753 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 CELSR2Q9HCU4 2923 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 APCP25054 2843 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 IGHV1-69DA0A0B4J2H0 117 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 TEX13DA0A0J9YY54 714 aaPredicted RBP4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 A0A1B0GVG6 124 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 FAM90A26D6RGX4 464 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 J3QLI3 93 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 NPFFO15130 113 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SLC22A5O76082 557 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 DHFRP00374 187 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 IGHV1-69P01742 117 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 HLA-AP01891 365 aaKnown RBP4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 OR5AC1P0C628 307 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 CT45A6P0DMU7 189 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 CT45A5P0DMU8 189 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 CT45A7P0DMV0 189 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 F2RP25116 425 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 IL3RAP26951 378 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 HTR1DP28221 377 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 DUTP33316 252 aaKnown RBP4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SAA4P35542 130 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 ZNF137PP52743 207 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 RAG2P55895 527 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 BRWD1-AS2P59051 145 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 TAS2R31P59538 309 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 UBE2MP61081 183 aaKnown RBP4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 RND3P61587 244 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SUPT4H1P63272 117 aaKnown RBP4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 DHRS2Q13268 280 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SLC9A3R2Q15599 337 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SP6Q3SY56 376 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 TMEM128Q5BJH2 165 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 OR2B11Q5JQS5 317 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 KLF17Q5JT82 389 aaPredicted RBP4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 TPTE2P1Q5T6R2 138 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 BRD3OSQ6XYD6 125 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SPNS3Q6ZMD2 512 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 Q6ZTC4 211 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 KCTD9Q7L273 389 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SGPP2Q8IWX5 399 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 CCDC71LQ8N9Z2 235 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 THAP6Q8TBB0 222 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 CASTOR1Q8WTX7 329 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 TCTEX1D2Q8WW35 142 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 C18orf12Q96KH6 178 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 TP53RKQ96S44 253 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 S1PR3Q99500 378 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SMR3AQ99954 134 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 C1RLQ9NZP8 487 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 AMMECR1Q9Y4X0 333 aaPredicted RBP4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 HILPDAQ9Y5L2 63 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 SOX21Q9Y651 276 aaPredicted RBP4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 ALG5Q9Y673 324 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.39□□□□□ -1.716e-7■■■□□ 15.2
GAPVD1-218ENST00000495588 HECTD1Q9ULT8 2610 aa4.39□□□□□ -1.71
GAPVD1-218ENST00000495588 ZNF469Q96JG9 3925 aaPredicted RBP4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 IGHV3-72A0A0B4J1Y9 119 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 IGHV1-3A0A0C4DH29 117 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 A0A0U1RQK1 487 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 C3orf85A0A1B0GTC6 90 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 A0A1W2PPI3 338 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 C9orf170A2RU37 121 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 C7orf66A4D0T2 115 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 VGLL3A8MV65 326 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 LEUTXA8MZ59 168 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 H0Y980 276 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 H0YJW9 148 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 PRAF2O60831 178 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 RAMP3O60896 148 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 FCGR3BO75015 233 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 SFT2D2O95562 160 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 GAPDHP04406 335 aaKnown RBP4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 IL5P05113 134 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 MT3P25713 68 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 S100GP29377 79 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 THBS3P49746 956 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 ZNF816Q0VGE8 651 aaPredicted RBP4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 CATR1Q13166 79 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 CBX3Q13185 183 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 TMEM187Q14656 261 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 SSX2Q16385 188 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 ANKRD55Q3KP44 614 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 ZNF585BQ52M93 769 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 MINOS1Q5TGZ0 78 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 GPR157Q5UAW9 335 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 FAM71F2Q6NXP2 309 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 IL17RELQ6ZVW7 336 aa4.38□□□□□ -1.71
GAPVD1-218ENST00000495588 LYG2Q86SG7 212 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms