RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TCRBP04435 133 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 ELANEP08246 267 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 EGR2P11161 476 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-235ENST00000495515 RAB25P57735 213 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 KRTAP10-3P60369 221 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 SSBP2P81877 361 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-235ENST00000495515 CFHR3Q02985 330 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 FOXE3Q13461 319 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 TMEM187Q14656 261 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 CXorf66Q5JRM2 361 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-235ENST00000495515 TMEM268Q5VZI3 342 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 LGI3Q8N145 548 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 C11orf44Q8N8P7 122 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 MINDY2Q8NBR6 621 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 OR5M8Q8NGP6 311 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 OR4A16Q8NH70 328 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 ENKURQ8TC29 256 aa13.43□□□□□ -0.26
HDAC6-235ENST00000495515 A0A1W2PN81 502 aa13.42□□□□□ -0.26
HDAC6-235ENST00000495515 TCRBV4S1A1TA0A5B7 111 aa13.42□□□□□ -0.26
HDAC6-235ENST00000495515 RBMXL2O75526 392 aaKnown RBP13.42□□□□□ -0.26
HDAC6-235ENST00000495515 CD28P10747 220 aa13.42□□□□□ -0.26
HDAC6-235ENST00000495515 PPIFP30405 207 aaKnown RBP13.42□□□□□ -0.26
HDAC6-235ENST00000495515 CHRNA7P36544 502 aa13.42□□□□□ -0.26
HDAC6-235ENST00000495515 SUPT4H1P63272 117 aaKnown RBP13.42□□□□□ -0.26
HDAC6-235ENST00000495515 SRSF4Q08170 494 aaKnown RBP13.42□□□□□ -0.26
HDAC6-235ENST00000495515 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
HDAC6-235ENST00000495515 TMEM65Q6PI78 240 aa13.42□□□□□ -0.26
HDAC6-235ENST00000495515 SELENOHQ8IZQ5 122 aaKnown RBP13.42□□□□□ -0.26
HDAC6-235ENST00000495515 FYTTD1Q96QD9 318 aaKnown RBP13.42□□□□□ -0.26
HDAC6-235ENST00000495515 C20orf85Q9H1P6 137 aa13.42□□□□□ -0.26
HDAC6-235ENST00000495515 FLVCR2Q9UPI3 526 aa13.42□□□□□ -0.26
HDAC6-235ENST00000495515 TRAV3A0A0B4J244 114 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 SFT2D2O95562 160 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 IGKV1-5P01602 117 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 OR9G9P0C7N8 305 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 CD83Q01151 205 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 IFITM3Q01628 133 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 PPP1R1AQ13522 171 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 C4orf46Q504U0 113 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 C19orf54Q5BKX5 351 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 KHDC1LQ5JSQ8 128 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 C10orf55Q5SWW7 151 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 C10orf99Q6UWK7 81 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 OR1L8Q8NGR8 309 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 OR5B3Q8NH48 314 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 SRSF8Q9BRL6 282 aaKnown RBP13.41□□□□□ -0.26
HDAC6-235ENST00000495515 ALX4Q9H161 411 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-235ENST00000495515 ZFP57Q9NU63 452 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 NUDT15Q9NV35 164 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 OR51B2Q9Y5P1 312 aa13.41□□□□□ -0.26
HDAC6-235ENST00000495515 TSSC4Q9Y5U2 329 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-235ENST00000495515 A0A0B4J2A0 478 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 DUXBA0A1W2PPF3 345 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 C15orf61A6NNL5 157 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 IGLV1-40P01703 118 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 HLA-AP01891 365 aaKnown RBP13.4□□□□□ -0.26
HDAC6-235ENST00000495515 OR4E1P0C645 316 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 HSD17B13Q7Z5P4 300 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-235ENST00000495515 NDUFA11Q86Y39 141 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 MRPL41Q8IXM3 137 aaKnown RBP13.4□□□□□ -0.26
HDAC6-235ENST00000495515 LHFPL5Q8TAF8 219 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 CASTOR1Q8WTX7 329 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 LSM10Q969L4 123 aaKnown RBP13.4□□□□□ -0.26
HDAC6-235ENST00000495515 CITED2Q99967 270 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-235ENST00000495515 QTRT1Q9BXR0 403 aaKnown RBP13.4□□□□□ -0.26
HDAC6-235ENST00000495515 SHPKQ9UHJ6 478 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 NSG2Q9Y328 171 aa13.4□□□□□ -0.26
HDAC6-235ENST00000495515 TRAV6A0A075B6T7 132 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 H3BUA1 57 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 M0QZ24 198 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 H2AFB2P0C5Z0 115 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 TRAPPC2P0DI81 140 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 TRAPPC2BP0DI82 140 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 PF4V1P10720 104 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 ANXA7P20073 488 aaKnown RBP13.39□□□□□ -0.27
HDAC6-235ENST00000495515 PSMB8P28062 276 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 OR2B8PP59922 312 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 SLC35G3Q8N808 338 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 RNF152Q8N8N0 203 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 OR5T1Q8NG75 326 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 COQ8AQ8NI60 647 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 FAM110DQ8TAY7 271 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-235ENST00000495515 PDCD10Q9BUL8 212 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 SLA2Q9H6Q3 261 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 ZNF355PQ9NSJ1 428 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 TMEM14BQ9NUH8 114 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 CACFD1Q9UGQ2 172 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 ZNF257Q9Y2Q1 563 aa13.39□□□□□ -0.27
HDAC6-235ENST00000495515 TEX50A0A1B0GTY4 177 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 C9orf170A2RU37 121 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 DHFRP00374 187 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 P0C879 139 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 DHRS2Q13268 280 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 C2orf68Q2NKX9 166 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 TCTEX1D4Q5JR98 221 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 LYG2Q86SG7 212 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 ZNF429Q86V71 674 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 TTC9CQ8N5M4 171 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 LRTM2Q8N967 370 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms