RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-215	ENST00000495341	CTRB2	Q6GPI1	263 aa		12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	DMBX1	Q8NFW5	382 aa		12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	GIMAP1	Q8WWP7	306 aa		12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	S100A16	Q96FQ6	103 aa	Known RBP	12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	CCDC140	Q96MF4	163 aa		12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	NEURL2	Q9BR09	285 aa		12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	SLC2A8	Q9NY64	477 aa		12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	EHF	Q9NZC4	300 aa		12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	DMRT1	Q9Y5R6	373 aa		12.52	□□□□□ -0.41
LMNA-215	ENST00000495341	XRCC3	O43542	346 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	IFNA6	P05013	189 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	FOLR2	P14207	255 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	RPA2	P15927	270 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	NQO2	P16083	231 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	LSM3	P62310	102 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	UBE2NL	Q5JXB2	153 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	TMEM69	Q5SWH9	247 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	CROCCP3	Q8IVE0	287 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	LAX1	Q8IWV1	398 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	BORCS5	Q969J3	196 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	VCX3A	Q9NNX9	186 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	TMEM140	Q9NV12	185 aa		12.51	□□□□□ -0.41
LMNA-215	ENST00000495341	DYNC2H1	Q8NCM8	4307 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	TRAV3	A0A0B4J244	114 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	ZNF320	A2RRD8	509 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	MFSD2B	A6NFX1	497 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	CGB1	A6NKQ9	187 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	LGALS9	O00182	355 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	S1PR2	O95136	353 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	CD7	P09564	240 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	OR2B8P	P59922	312 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	DEFB114	Q30KQ6	69 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	FAM106A	Q4KMX7	169 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	SAMD12	Q8N8I0	201 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	CD300LF	Q8TDQ1	290 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	CACNG8	Q8WXS5	425 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	ZNF2	Q9BSG1	426 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	COMMD5	Q9GZQ3	224 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	EDA2R	Q9HAV5	297 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	ZC4H2	Q9NQZ6	224 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	TECR	Q9NZ01	308 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	SELENOK	Q9Y6D0	94 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	CEPT1	Q9Y6K0	416 aa		12.5	□□□□□ -0.41
LMNA-215	ENST00000495341	IGLV11-55	A0A075B6I3	123 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	TRBV7-1	A0A0A6YYK4	115 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	ZNF785	A8K8V0	405 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	UPK2	O00526	184 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	PMP2	P02689	132 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	RLN1	P04808	185 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	RPS19	P39019	145 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	RFX2	P48378	723 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	TAS2R20	P59543	309 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	ERVK-16	P61578	105 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	GPHB5	Q86YW7	130 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	DEFB125	Q8N687	156 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	OR5H2	Q8NGV7	314 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	WDR89	Q96FK6	387 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	CXorf58	Q96LI9	332 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	WFDC10A	Q9H1F0	79 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	PLEKHA2	Q9HB19	425 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	RETN	Q9HD89	108 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	COMMD9	Q9P000	198 aa		12.49	□□□□□ -0.41
LMNA-215	ENST00000495341	GNRHR	P30968	328 aa		12.48	□□□□□ -0.41
LMNA-215	ENST00000495341	POU2AF1	Q16633	256 aa		12.48	□□□□□ -0.41
LMNA-215	ENST00000495341	QTRT1	Q9BXR0	403 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-215	ENST00000495341	SRD5A3	Q9H8P0	318 aa		12.48	□□□□□ -0.41
LMNA-215	ENST00000495341		A0A087WXM4	84 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	IGLC7	A0M8Q6	106 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	OR11H12	B2RN74	326 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	CLEC3B	P05452	202 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	CBLN1	P23435	193 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	GPR183	P32249	361 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	TAS2R46	P59540	309 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	KLK9	Q2XQG4	91 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	ZNF57	Q68EA5	555 aa	Predicted RBP	12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	TSPAN14	Q8NG11	270 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	MOB3A	Q96BX8	217 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	YIPF6	Q96EC8	236 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	SRSF8	Q9BRL6	282 aa	Known RBP	12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	THYN1	Q9P016	225 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	KLK9	Q9UKQ9	250 aa		12.47	□□□□□ -0.41
LMNA-215	ENST00000495341	TMEM213	A2RRL7	107 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	MARCH11	A6NNE9	402 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341		A8MWP6	167 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	CYB5B	O43169	146 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	TNFAIP8	O95379	198 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	PRSS3	P35030	304 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	THOC7	Q6I9Y2	204 aa	Known RBP	12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	DHRS11	Q6UWP2	260 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	SLC16A13	Q7RTY0	426 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	CMTM1	Q8IZ96	169 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	UXS1	Q8NBZ7	420 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	OR10W1	Q8NGF6	305 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	FAM110A	Q9BQ89	295 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	HINT2	Q9BX68	163 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	FXYD6	Q9H0Q3	95 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	GAR1	Q9NY12	217 aa	Known RBP	12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	ANAPC10	Q9UM13	185 aa		12.46	□□□□□ -0.41
LMNA-215	ENST00000495341	IGHV3-35	A0A0C4DH35	117 aa		12.45	□□□□□ -0.42
LMNA-215	ENST00000495341	PGLYRP1	O75594	196 aa	Predicted RBP	12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms