RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 OR8B2Q96RD0 313 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 PBDC1Q9BVG4 233 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 SLC35D1Q9NTN3 355 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 FBN3Q75N90 2809 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 MMP23AO75900 390 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 CRYZL1O95825 349 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 IFNA17P01571 189 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 IL6RP08887 468 aaPredicted RBP13.24□□□□□ -0.29
CBX4-204ENST00000495122 CT45A6P0DMU7 189 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 CT45A5P0DMU8 189 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 CT45A7P0DMV0 189 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 RAB13P51153 203 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 DSCR9P59020 149 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 TUSC1Q2TAM9 212 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 C10orf91Q5T1B1 145 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 TMEM182Q6ZP80 229 aaPredicted RBP13.24□□□□□ -0.29
CBX4-204ENST00000495122 CENPVQ7Z7K6 275 aaPredicted RBP13.24□□□□□ -0.29
CBX4-204ENST00000495122 PDPNQ86YL7 162 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 OR4A5Q8NH83 315 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 LEAP2Q969E1 77 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 QTRT1Q9BXR0 403 aaKnown RBP13.24□□□□□ -0.29
CBX4-204ENST00000495122 SEC11CQ9BY50 192 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 SH3BGRL3Q9H299 93 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 TMEM14BQ9NUH8 114 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 BET1LQ9NYM9 111 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 CARHSP1Q9Y2V2 147 aaKnown RBP13.24□□□□□ -0.29
CBX4-204ENST00000495122 ATRQ13535 2644 aa13.24□□□□□ -0.29
CBX4-204ENST00000495122 TRAV1-1A0A0B4J248 108 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 CD5P06127 495 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 IGHV1-8P0DP01 117 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 CCL3L1P16619 93 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 COL8A2P25067 703 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 MC5RP33032 325 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 SNCAP37840 140 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 HSPE1P61604 102 aaKnown RBP13.23□□□□□ -0.29
CBX4-204ENST00000495122 ZNF616Q08AN1 781 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 PEA15Q15121 130 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 TMEM177Q53S58 311 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 ZNF841Q6ZN19 808 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 HAPLN4Q86UW8 402 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 OR5AN1Q8NGI8 311 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 OR10X1Q8NGY0 326 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 VSTM2AQ8TAG5 236 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 OR4C12Q96R67 309 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 WDR61Q9GZS3 305 aaKnown RBP13.23□□□□□ -0.29
CBX4-204ENST00000495122 TMEM133Q9H2Q1 129 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 CHODLQ9H9P2 273 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 COL6A5A8TX70 2615 aa13.23□□□□□ -0.29
CBX4-204ENST00000495122 PMS2P5A8MQ11 134 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 MPDU1O75352 247 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 MBP02144 154 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 VDAC2P45880 294 aaPredicted RBP13.22□□□□□ -0.29
CBX4-204ENST00000495122 PRRX1P54821 245 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 RAB11AP62491 216 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 OR4A47Q6IF82 309 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 C1orf229Q6ZS94 237 aaPredicted RBP13.22□□□□□ -0.29
CBX4-204ENST00000495122 OR13D1Q8NGV5 346 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 FAM213BQ8TBF2 198 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 TAF15Q92804 592 aaKnown RBP eCLIP13.22□□□□□ -0.29
CBX4-204ENST00000495122 ST6GALNAC6Q969X2 333 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 RBMXL1Q96E39 390 aaKnown RBP13.22□□□□□ -0.29
CBX4-204ENST00000495122 MDFIQ99750 246 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 TCF19Q9Y242 345 aa13.22□□□□□ -0.29
CBX4-204ENST00000495122 AMMECR1Q9Y4X0 333 aaPredicted RBP13.22□□□□□ -0.29
CBX4-204ENST00000495122 A0A1W2PPE3 182 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 FNDC10F2Z333 226 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 RNASEK-C17orf49H0YIS7 233 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 IGHV3-7P01780 117 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 SLC25A16P16260 332 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 LINC00205P59089 165 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 LOXL1Q08397 574 aaPredicted RBP13.21□□□□□ -0.29
CBX4-204ENST00000495122 ARL16Q0P5N6 197 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 THNSL2Q86YJ6 484 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 SVBPQ8N300 66 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 BEND2Q8NDZ0 799 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 OR5B3Q8NH48 314 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 NARS2Q96I59 477 aaKnown RBP13.21□□□□□ -0.29
CBX4-204ENST00000495122 TREM1Q9NP99 234 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 YAE1D1Q9NRH1 226 aa13.21□□□□□ -0.29
CBX4-204ENST00000495122 C17orf112F2Z3M2 114 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 INS-IGF2F8WCM5 200 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 H0YJW9 148 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 UPK2O00526 184 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 H2AFB1P0C5Y9 115 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 EFNA4P52798 201 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 DLK1P80370 383 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 TMEM249Q2WGJ8 235 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 WDR25Q64LD2 544 aaPredicted RBP13.2□□□□□ -0.3
CBX4-204ENST00000495122 ABHD12Q8N2K0 398 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 LY6G5BQ8NDX9 201 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 OR4C13Q8NGP0 309 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 FAM168AQ92567 244 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
CBX4-204ENST00000495122 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 KIAA1456Q9P272 454 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms