RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 RBFOX2O43251 390 aaKnown RBP eCLIP17.43■□□□□ 0.383e-16■■□□□ 14
COL27A1-208ENST00000494780 TIMM50Q3ZCQ8 353 aa17.43■□□□□ 0.38
COL27A1-208ENST00000494780 SPARTQ8N0X7 666 aa17.43■□□□□ 0.38
COL27A1-208ENST00000494780 UXS1Q8NBZ7 420 aa17.43■□□□□ 0.38
COL27A1-208ENST00000494780 SECTM1Q8WVN6 248 aa17.43■□□□□ 0.38
COL27A1-208ENST00000494780 FCGR1BQ92637 280 aa17.43■□□□□ 0.38
COL27A1-208ENST00000494780 CXorf58Q96LI9 332 aa17.43■□□□□ 0.38
COL27A1-208ENST00000494780 MLXQ9UH92 298 aa17.43■□□□□ 0.38
COL27A1-208ENST00000494780 CGB1A6NKQ9 187 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 TNFSF12O43508 249 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 MYOD1P15172 320 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 FCGR2CP31995 323 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 SCAND1P57086 179 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 ANKRD55Q3KP44 614 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 SPAG16Q8N0X2 631 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 OR52B4Q8NGK2 314 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 OR13F1Q8NGS4 319 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 HRASLSQ9HDD0 168 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 BIRC6Q9NR09 4857 aa17.42■□□□□ 0.38
COL27A1-208ENST00000494780 REG1AP05451 166 aa17.41■□□□□ 0.38
COL27A1-208ENST00000494780 CLEC3BP05452 202 aa17.41■□□□□ 0.38
COL27A1-208ENST00000494780 OR2B8PP59922 312 aa17.41■□□□□ 0.38
COL27A1-208ENST00000494780 HOGA1Q86XE5 327 aa17.41■□□□□ 0.38
COL27A1-208ENST00000494780 MARC2Q969Z3 335 aa17.41■□□□□ 0.38
COL27A1-208ENST00000494780 ETV7Q9Y603 341 aa17.41■□□□□ 0.38
COL27A1-208ENST00000494780 SELENOKQ9Y6D0 94 aa17.41■□□□□ 0.38
COL27A1-208ENST00000494780 TRAV18A0A075B6X5 111 aa17.4■□□□□ 0.38
COL27A1-208ENST00000494780 MFSD2BA6NFX1 497 aa17.4■□□□□ 0.38
COL27A1-208ENST00000494780 PPYP01298 95 aa17.4■□□□□ 0.38
COL27A1-208ENST00000494780 TAS2R31P59538 309 aa17.4■□□□□ 0.38
COL27A1-208ENST00000494780 GVQW1Q8N7I0 195 aa17.4■□□□□ 0.38
COL27A1-208ENST00000494780 SRSF8Q9BRL6 282 aaKnown RBP17.4■□□□□ 0.38
COL27A1-208ENST00000494780 GGTLC1Q9BX51 225 aa17.4■□□□□ 0.38
COL27A1-208ENST00000494780 A0A0A6YYH2 397 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 TRAV25A0A0B4J276 109 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 A6NJ64 397 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 SCAF4O95104 1147 aaKnown RBP17.39■□□□□ 0.37
COL27A1-208ENST00000494780 HPRT1P00492 218 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 PTHLHP12272 177 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 NQO2P16083 231 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 SDC2P34741 201 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 CATR1Q13166 79 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 POU2AF1Q16633 256 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 TM4SF20Q53R12 229 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 BTNL8Q6UX41 500 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 SLC5A7Q9GZV3 580 aa17.39■□□□□ 0.37
COL27A1-208ENST00000494780 LOC102724200A0A096LPH7 203 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-208ENST00000494780 IGLC7A0M8Q6 106 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 SULT1C2O00338 296 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 UPK2O00526 184 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 FGF2P09038 288 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 C8orf88P0DMB2 117 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 UNQ9165/PRO28630Q6UXU0 137 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 OR5H6Q8NGV6 325 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 ZNF502Q8TBZ5 544 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 SLC25A38Q96DW6 304 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 COMMD5Q9GZQ3 224 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 THYN1Q9P016 225 aa17.38■□□□□ 0.37
COL27A1-208ENST00000494780 MRPL27Q9P0M9 148 aaKnown RBP17.38■□□□□ 0.37
COL27A1-208ENST00000494780 CLEC2LP0C7M8 214 aa17.37■□□□□ 0.37
COL27A1-208ENST00000494780 PTBP1P26599 531 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL27A1-208ENST00000494780 GPR183P32249 361 aa17.37■□□□□ 0.37
COL27A1-208ENST00000494780 ELLP55199 621 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-208ENST00000494780 MXD1Q05195 221 aa17.37■□□□□ 0.37
COL27A1-208ENST00000494780 ZNF773Q6PK81 442 aa17.37■□□□□ 0.37
COL27A1-208ENST00000494780 CD300LFQ8TDQ1 290 aa17.37■□□□□ 0.37
COL27A1-208ENST00000494780 OVOL2Q9BRP0 275 aa17.37■□□□□ 0.37
COL27A1-208ENST00000494780 UFC1Q9Y3C8 167 aa17.37■□□□□ 0.37
COL27A1-208ENST00000494780 TRAV3A0A0B4J244 114 aa17.36■□□□□ 0.37
COL27A1-208ENST00000494780 FXYD4P59646 89 aa17.36■□□□□ 0.37
COL27A1-208ENST00000494780 ZNF585BQ52M93 769 aa17.36■□□□□ 0.37
COL27A1-208ENST00000494780 IDNKQ5T6J7 187 aa17.36■□□□□ 0.37
COL27A1-208ENST00000494780 PLET1Q6UQ28 207 aa17.36■□□□□ 0.37
COL27A1-208ENST00000494780 RBPMS2Q6ZRY4 209 aaKnown RBP17.36■□□□□ 0.37
COL27A1-208ENST00000494780 GIMAP1Q8WWP7 306 aa17.36■□□□□ 0.37
COL27A1-208ENST00000494780 YTHDF1Q9BYJ9 559 aaKnown RBP17.36■□□□□ 0.37
COL27A1-208ENST00000494780 AUNIPQ9H7T9 357 aa17.36■□□□□ 0.37
COL27A1-208ENST00000494780 CYB5BO43169 146 aa17.35■□□□□ 0.37
COL27A1-208ENST00000494780 CBX5P45973 191 aa17.35■□□□□ 0.37
COL27A1-208ENST00000494780 THOC7Q6I9Y2 204 aaKnown RBP17.35■□□□□ 0.37
COL27A1-208ENST00000494780 ZNF818PQ6ZRF7 136 aa17.35■□□□□ 0.37
COL27A1-208ENST00000494780 OR5AP2Q8NGF4 316 aa17.35■□□□□ 0.37
COL27A1-208ENST00000494780 OR1L6Q8NGR2 347 aa17.35■□□□□ 0.37
COL27A1-208ENST00000494780 QTRT1Q9BXR0 403 aaKnown RBP17.35■□□□□ 0.37
COL27A1-208ENST00000494780 ZNF436Q9C0F3 470 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-208ENST00000494780 PLEKHA2Q9HB19 425 aa17.35■□□□□ 0.37
COL27A1-208ENST00000494780 DIABLOQ9NR28 239 aa17.35■□□□□ 0.37
COL27A1-208ENST00000494780 TMEM140Q9NV12 185 aa17.35■□□□□ 0.37
COL27A1-208ENST00000494780 VN1R17PQ8TDU5 208 aa17.34■□□□□ 0.37
COL27A1-208ENST00000494780 BORCS5Q969J3 196 aa17.34■□□□□ 0.37
COL27A1-208ENST00000494780 RNF167Q9H6Y7 350 aa17.34■□□□□ 0.37
COL27A1-208ENST00000494780 COMMD9Q9P000 198 aa17.34■□□□□ 0.37
COL27A1-208ENST00000494780 AADACL3Q5VUY0 350 aa17.33■□□□□ 0.36
COL27A1-208ENST00000494780 HSD17B13Q7Z5P4 300 aaPredicted RBP17.33■□□□□ 0.36
COL27A1-208ENST00000494780 SLC38A6Q8IZM9 456 aa17.33■□□□□ 0.36
COL27A1-208ENST00000494780 OR2C3Q8N628 320 aa17.33■□□□□ 0.36
COL27A1-208ENST00000494780 GDPD1Q8N9F7 314 aa17.33■□□□□ 0.36
COL27A1-208ENST00000494780 DMBX1Q8NFW5 382 aa17.33■□□□□ 0.36
COL27A1-208ENST00000494780 OR51H1Q8NH63 302 aa17.33■□□□□ 0.36
COL27A1-208ENST00000494780 Q9H521 79 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms