RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 VSTM2AQ8TAG5 236 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 LGALS14Q8TCE9 139 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 SECTM1Q8WVN6 248 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 OVOL2Q9BRP0 275 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 CENPOQ9BU64 300 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 CCL28Q9NRJ3 127 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 UBQLN2Q9UHD9 624 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 DAPK2Q9UIK4 370 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 ANXA10Q9UJ72 324 aa9.45□□□□□ -0.9
SKA1-205ENST00000494518 IGLV11-55A0A075B6I3 123 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 LOC102724200A0A096LPH7 203 aaPredicted RBP9.44□□□□□ -0.9
SKA1-205ENST00000494518 TRAV3A0A0B4J244 114 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 A8MWP6 167 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 SLC22A5O76082 557 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 LY6G6CO95867 125 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 CLEC3BP05452 202 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 CRYGCP07315 174 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 RPA2P15927 270 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 HLA-GP17693 338 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 EWSR1Q01844 656 aaKnown RBP eCLIP9.44□□□□□ -0.9
SKA1-205ENST00000494518 ARL6IP1Q15041 203 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 ZNF585BQ52M93 769 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 OR4A47Q6IF82 309 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 IZUMO2Q6UXV1 221 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 GVQW1Q8N7I0 195 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 LINC00476Q8WZB0 136 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 DCSTAMPQ9H295 470 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 HRASLSQ9HDD0 168 aa9.44□□□□□ -0.9
SKA1-205ENST00000494518 A0A0J9YWU9 116 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 NOTOA8MTQ0 251 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 SULT1C2O00338 296 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 DHFRP00374 187 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 HRASP01112 189 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 MAS1LP35410 378 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 ARPC4P59998 168 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 TIMM50Q3ZCQ8 353 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 SPAG16Q8N0X2 631 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 OR13F1Q8NGS4 319 aa9.43□□□□□ -0.9
SKA1-205ENST00000494518 TXNL4BQ9NX01 149 aaKnown RBP9.43□□□□□ -0.9
SKA1-205ENST00000494518 RRP15Q9Y3B9 282 aaKnown RBP9.43□□□□□ -0.9
SKA1-205ENST00000494518 IGHV3-21A0A0B4J1V1 117 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 ERICH4A6NGS2 130 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 HIST1H1BP16401 226 aaKnown RBP9.42□□□□□ -0.9
SKA1-205ENST00000494518 PSMB9P28065 219 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 FCGR2CP31995 323 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 FXYD4P59646 89 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 OR2B8PP59922 312 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 ZNF66Q6ZN08 573 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
SKA1-205ENST00000494518 OR10W1Q8NGF6 305 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 OR1L6Q8NGR2 347 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 RHBDL2Q9NX52 303 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 BLOC1S6Q9UL45 172 aa9.42□□□□□ -0.9
SKA1-205ENST00000494518 TRAV18A0A075B6X5 111 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 IGHV3OR16-8A0A075B7F1 116 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 TRBV7-1A0A0A6YYK4 115 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 IGLC7A0M8Q6 106 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 CLEC2LP0C7M8 214 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 MXD1Q05195 221 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 ANKRD55Q3KP44 614 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 SFXN4Q6P4A7 337 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 ZNF773Q6PK81 442 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 PLET1Q6UQ28 207 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 BEST4Q8NFU0 473 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 OR5H6Q8NGV6 325 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 OR51H1Q8NH63 302 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 ZNF502Q8TBZ5 544 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 CXorf58Q96LI9 332 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 SLC5A7Q9GZV3 580 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 BET1LQ9NYM9 111 aa9.41□□□□□ -0.9
SKA1-205ENST00000494518 MEIS3P1A6NDR6 274 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 OR2T8A6NH00 312 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 UPK2O00526 184 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 ZNF207O43670 478 aaKnown RBP9.4□□□□□ -0.9
SKA1-205ENST00000494518 S1PR2O95136 353 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 PPYP01298 95 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 RPL35AP18077 110 aaKnown RBP9.4□□□□□ -0.9
SKA1-205ENST00000494518 LYG2Q86SG7 212 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 TMEM17Q86X19 198 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 OR2C3Q8N628 320 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 RNF167Q9H6Y7 350 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
SKA1-205ENST00000494518 TGOLN2O43493 480 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 SPRY2O43597 315 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 C8orf88P0DMB2 117 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 GALP22466 123 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 SDC2P34741 201 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 KLK9Q2XQG4 91 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 AADACL3Q5VUY0 350 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 ZNF818PQ6ZRF7 136 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 DMBX1Q8NFW5 382 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 MARC2Q969Z3 335 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 SLC25A38Q96DW6 304 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 HINT2Q9BX68 163 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 COMMD5Q9GZQ3 224 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 VCX3BQ9H321 246 aa9.39□□□□□ -0.91
SKA1-205ENST00000494518 MRPL27Q9P0M9 148 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms