RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 TLE1Q04724 770 aa13.8□□□□□ -0.2
SYP-208ENST00000494396 EIF4EBP1Q13541 118 aaPredicted RBP13.8□□□□□ -0.2
SYP-208ENST00000494396 IGFBP7Q16270 282 aa13.8□□□□□ -0.2
SYP-208ENST00000494396 AARDQ4LEZ3 155 aa13.8□□□□□ -0.2
SYP-208ENST00000494396 LEMD1Q68G75 181 aa13.8□□□□□ -0.2
SYP-208ENST00000494396 C19orf35Q6ZS72 473 aa13.8□□□□□ -0.2
SYP-208ENST00000494396 MDP1Q86V88 176 aa13.8□□□□□ -0.2
SYP-208ENST00000494396 DERL1Q9BUN8 251 aa13.8□□□□□ -0.2
SYP-208ENST00000494396 POLDIP2Q9Y2S7 368 aa13.8□□□□□ -0.2
SYP-208ENST00000494396 TRBV20OR9-2A0A075B6H5 130 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 ZG16O60844 167 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 CRYAAP02489 173 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 IGHV1-2P23083 117 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 CBLN1P23435 193 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 TMPRSS3P57727 454 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 BATFQ16520 125 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 KRTCAP3Q53RY4 240 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 H2BFWTQ7Z2G1 175 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 ZNF114Q8NC26 417 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 OR1L6Q8NGR2 347 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 OR5B3Q8NH48 314 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 OCC1Q8TAD7 63 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 SFXN3Q9BWM7 321 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 MRPS16Q9Y3D3 137 aaKnown RBP13.79□□□□□ -0.2
SYP-208ENST00000494396 SPTBN4Q9H254 2564 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 TRGV10A0A0A0MS01 117 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 K7EP13 123 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 CDIPTO14735 213 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 TCF21O43680 179 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 OR5G3P0C626 314 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 AREGP15514 252 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 G6PCP35575 357 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 COTL1Q14019 142 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 HLA-DRB5Q30154 266 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 VWA1Q6PCB0 445 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 UHRF2Q96PU4 802 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 LAMTOR2Q9Y2Q5 125 aa13.79□□□□□ -0.2
SYP-208ENST00000494396 MBD3L4A6NDZ8 208 aaPredicted RBP13.78□□□□□ -0.2
SYP-208ENST00000494396 MBD3L3A6NE82 208 aaPredicted RBP13.78□□□□□ -0.2
SYP-208ENST00000494396 MBD3L5A6NJ08 208 aaPredicted RBP13.78□□□□□ -0.2
SYP-208ENST00000494396 TOMM40O96008 361 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 IGLC2P0DOY2 106 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 IGLC3P0DOY3 106 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 UBE2G2P60604 165 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 MORN2Q502X0 79 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 SPATA45Q537H7 98 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 LRP11Q86VZ4 500 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 MBD3L2Q8NHZ7 208 aaPredicted RBP13.78□□□□□ -0.2
SYP-208ENST00000494396 C22orf15Q8WYQ4 148 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 KCNS1Q96KK3 526 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 CDC42EP3Q9UKI2 254 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 MAP1BP46821 2468 aaKnown RBP13.78□□□□□ -0.2
SYP-208ENST00000494396 SVILO95425 2214 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 LYZL6O75951 148 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 FOXF2Q12947 444 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 PMCHL1Q16048 86 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 FAM216AQ8WUB2 273 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 GALMQ96C23 342 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 STARD4Q96DR4 205 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 PLSCR4Q9NRQ2 329 aa13.78□□□□□ -0.2
SYP-208ENST00000494396 J3QW42 95 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 SH2D1BO14796 132 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 NXPH2O95156 264 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 HNRNPA3P51991 378 aaKnown RBP13.77□□□□□ -0.21
SYP-208ENST00000494396 HTD2P86397 168 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 ZNF146Q15072 292 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 C21orf62-AS1Q17RA5 79 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 PNKDQ8N490 385 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 Q8N976 141 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 TXN2Q99757 166 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 RTL8AQ9BWD3 113 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 FBXL7Q9UJT9 491 aa13.77□□□□□ -0.21
SYP-208ENST00000494396 NKX6-3A6NJ46 265 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 SNURFLB1AK76 121 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 OR2H2O95918 312 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 ARL14EPLP0DKL9 152 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 PTTG1IPP53801 180 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 UCNP55089 124 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 ERVK11-1P61568 191 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 GABRA6Q16445 453 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 ZNF718Q3SXZ3 478 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 PDLIM3Q53GG5 364 aaPredicted RBP13.76□□□□□ -0.21
SYP-208ENST00000494396 MMD2Q8IY49 270 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 HSD17B10Q99714 261 aaKnown RBP13.76□□□□□ -0.21
SYP-208ENST00000494396 NRN1Q9NPD7 142 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 TBL2Q9Y4P3 447 aaKnown RBP13.76□□□□□ -0.21
SYP-208ENST00000494396 DOCK11Q5JSL3 2073 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 TRAV38-1A0A0B4J264 116 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 RAMP3O60896 148 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 EGR1P18146 543 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 CDKN1BP46527 198 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 PRRX1P54821 245 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 KRTDAPP60985 99 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 SEM1Q6ZVN7 128 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 C1orf162Q8NEQ5 155 aaPredicted RBP13.76□□□□□ -0.21
SYP-208ENST00000494396 ZNF488Q96MN9 340 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 PROCRQ9UNN8 238 aa13.76□□□□□ -0.21
SYP-208ENST00000494396 SPENQ96T58 3664 aaKnown RBP13.75□□□□□ -0.21
SYP-208ENST00000494396 HYPMO75409 117 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms