RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PAX9P55771 341 aa5.78□□□□□ -1.48
VPS13B-205ENST00000493587 MGAT2Q10469 447 aa5.78□□□□□ -1.48
VPS13B-205ENST00000493587 ZNF793Q6ZN11 406 aa5.78□□□□□ -1.48
VPS13B-205ENST00000493587 OR5AN1Q8NGI8 311 aa5.78□□□□□ -1.48
VPS13B-205ENST00000493587 OR4A16Q8NH70 328 aa5.78□□□□□ -1.48
VPS13B-205ENST00000493587 HOXB13Q92826 284 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-205ENST00000493587 MSI2Q96DH6 328 aaKnown RBP5.78□□□□□ -1.48
VPS13B-205ENST00000493587 COL25A1Q9BXS0 654 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-205ENST00000493587 ESPL1Q14674 2120 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 FABP5P3A8MUU1 101 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 C4orf51C9J302 202 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 H3BMG7 143 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 ENSAO43768 121 aaKnown RBP5.77□□□□□ -1.49
VPS13B-205ENST00000493587 P2RY2P41231 377 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 WASP42768 502 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 KIR2DL2P43627 348 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-205ENST00000493587 EMDP50402 254 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 TAS2R45P59539 299 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 RPS16P62249 146 aaKnown RBP5.77□□□□□ -1.49
VPS13B-205ENST00000493587 NNATQ16517 81 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 TIGITQ495A1 244 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 FAM69BQ5VUD6 431 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 ADAMTSL4Q6UY14 1074 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 DIDO1Q9BTC0 2240 aaKnown RBP5.77□□□□□ -1.49
VPS13B-205ENST00000493587 LOC101059948A0A1B0GTJ6 334 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 CD300LBA8K4G0 201 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 LYPD3O95274 346 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 CT45A6P0DMU7 189 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 CT45A5P0DMU8 189 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 CT45A7P0DMV0 189 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 FASLGP48023 281 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 CAMPP49913 170 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 LGALS4P56470 323 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 EIF3IQ13347 325 aaKnown RBP5.77□□□□□ -1.49
VPS13B-205ENST00000493587 ZIC1Q15915 447 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 MRPL23Q16540 153 aaKnown RBP5.77□□□□□ -1.49
VPS13B-205ENST00000493587 TBR1Q16650 682 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 GAGE13Q4V321 117 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 CT45A1Q5HYN5 189 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 RNF144BQ7Z419 303 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 TTC9CQ8N5M4 171 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 CT45A3Q8NHU0 189 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 ELSPBP1Q96BH3 223 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 SFXN3Q9BWM7 321 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 FOXQ1Q9C009 403 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 SAP30LQ9HAJ7 183 aa5.77□□□□□ -1.49
VPS13B-205ENST00000493587 SOX21Q9Y651 276 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-205ENST00000493587 FER1L5A0AVI2 2057 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 TRAV9-1A0A075B6T8 112 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 TEX50A0A1B0GTY4 177 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 F8W1H4 67 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 SYS1-DBNDD2H3BUS1 97 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 CXorf1O96002 111 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 POLR2LP62875 67 aaKnown RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 RPL8P62917 257 aaKnown RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 RPL18Q07020 188 aaKnown RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 RUNX3Q13761 415 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 AMTNQ6UX39 209 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 Q6ZUT4 128 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 RAB42Q8N4Z0 105 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 OR52N5Q8NH56 324 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 TAF15Q92804 592 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 NXF5Q9H1B4 397 aaKnown RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 SCRT2Q9NQ03 307 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 RABAC1Q9UI14 185 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 CSDC2Q9Y534 153 aaKnown RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 PCDH15Q96QU1 1955 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 TRAV5A0A0B4J249 113 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 AMY1AP04745 511 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 NPPCP23582 126 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 ZNF121P58317 390 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 SLC38A11Q08AI6 406 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 GAGE2BQ13066 116 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 RTL8BQ17RB0 113 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 IZUMO4Q1ZYL8 232 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 GAGE2EQ4V326 116 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 Q6ZSR6 202 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 PRSS41Q7RTY9 318 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 ZNF808Q8N4W9 903 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 FAM169BQ8N8A8 192 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 ONECUT1Q9UBC0 465 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 GAGE2DQ9UEU5 116 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 TRAV36DV7A0A075B6V5 113 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 A0A1W2PQF6 199 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 BGLAPP02818 100 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 PTGDSP41222 190 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 CSN1S1P47710 185 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 NMUP48645 174 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 EMP1P54849 157 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 SUMO3P55854 103 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 ATP5IP56385 69 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 ADTRPQ96IZ2 230 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 MS4A6AQ9H2W1 248 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 KLRF1Q9NZS2 232 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 C19orf25Q9UFG5 118 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-205ENST00000493587 OR1A2Q9Y585 309 aa5.76□□□□□ -1.49
VPS13B-205ENST00000493587 A0A0A6YYD5 115 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 KIR2DS5A0A0G2JLQ3 304 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 A0A0G2JNG1 304 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms