RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 LSM3P62310 102 aaKnown RBP13.04□□□□□ -0.32
SGMS1-204ENST00000492601 CATR1Q13166 79 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 GUCA2BQ16661 112 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 CTRB2Q6GPI1 263 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 OR4A5Q8NH83 315 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 GIMAP1Q8WWP7 306 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 CACNG8Q8WXS5 425 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 S100A16Q96FQ6 103 aaKnown RBP13.04□□□□□ -0.32
SGMS1-204ENST00000492601 NEURL2Q9BR09 285 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 EDA2RQ9HAV5 297 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 GAR1Q9NY12 217 aaKnown RBP13.04□□□□□ -0.32
SGMS1-204ENST00000492601 RBFOX2O43251 390 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■■■■□ 23.3
SGMS1-204ENST00000492601 XRCC3O43542 346 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 HPRT1P00492 218 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 CD7P09564 240 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 RPS19P39019 145 aaKnown RBP13.03□□□□□ -0.32
SGMS1-204ENST00000492601 TAS2R31P59538 309 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 OR2B8PP59922 312 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 HERV-K104P61576 105 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 DEFB114Q30KQ6 69 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 AADACL3Q5VUY0 350 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 SAMD12Q8N8I0 201 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 EEF1AKMT3Q96AZ1 226 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 ISOC1Q96CN7 298 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 RETNQ9HD89 108 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 EHFQ9NZC4 300 aa13.03□□□□□ -0.32
SGMS1-204ENST00000492601 ZNF320A2RRD8 509 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 MFSD2BA6NFX1 497 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 UPK2O00526 184 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 TPPPO94811 219 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 S1PR2O95136 353 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 NQO2P16083 231 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 HIST1H1BP16401 226 aaKnown RBP13.02□□□□□ -0.33
SGMS1-204ENST00000492601 RFX2P48378 723 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 UBE2NLQ5JXB2 153 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 GPHB5Q86YW7 130 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 CROCCP3Q8IVE0 287 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 DEFB125Q8N687 156 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 DMBX1Q8NFW5 382 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 WDR89Q96FK6 387 aaPredicted RBP13.02□□□□□ -0.33
SGMS1-204ENST00000492601 COMMD5Q9GZQ3 224 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 WFDC10AQ9H1F0 79 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 ZC4H2Q9NQZ6 224 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 TMEM140Q9NV12 185 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 CEPT1Q9Y6K0 416 aa13.02□□□□□ -0.33
SGMS1-204ENST00000492601 IGLV11-55A0A075B6I3 123 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 LGALS9O00182 355 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 TMEM127O75204 238 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 PMP2P02689 132 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 IFNA6P05013 189 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 GNRHRP30968 328 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 TAS2R20P59543 309 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 POU2AF1Q16633 256 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 TMEM69Q5SWH9 247 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 LAX1Q8IWV1 398 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 YIPF6Q96EC8 236 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 ZNF2Q9BSG1 426 aaPredicted RBP13.01□□□□□ -0.33
SGMS1-204ENST00000492601 SLC2A8Q9NY64 477 aa13.01□□□□□ -0.33
SGMS1-204ENST00000492601 TECRQ9NZ01 308 aaKnown RBP13.01□□□□□ -0.33
SGMS1-204ENST00000492601 IGLC7A0M8Q6 106 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 RLN1P04808 185 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 CLEC3BP05452 202 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 CBLN1P23435 193 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 KLK9Q2XQG4 91 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 FAM106AQ4KMX7 169 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 OR10W1Q8NGF6 305 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 FAM110AQ9BQ89 295 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 PLEKHA2Q9HB19 425 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 KLK9Q9UKQ9 250 aa13□□□□□ -0.33
SGMS1-204ENST00000492601 TRBV7-1A0A0A6YYK4 115 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 TMEM213A2RRL7 107 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 OR11H12B2RN74 326 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 GPR183P32249 361 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 DHRS11Q6UWP2 260 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 OR5H2Q8NGV7 314 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 CD300LFQ8TDQ1 290 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 MOB3AQ96BX8 217 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 CXorf58Q96LI9 332 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 QTRT1Q9BXR0 403 aaKnown RBP12.99□□□□□ -0.33
SGMS1-204ENST00000492601 SRD5A3Q9H8P0 318 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 VCX3AQ9NNX9 186 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 COMMD9Q9P000 198 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 MLXQ9UH92 298 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 ANAPC10Q9UM13 185 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 DNAH1Q9P2D7 4330 aa12.99□□□□□ -0.33
SGMS1-204ENST00000492601 IGHV3-35A0A0C4DH35 117 aa12.98□□□□□ -0.33
SGMS1-204ENST00000492601 RBMY1BA6NDE4 496 aaKnown RBP12.98□□□□□ -0.33
SGMS1-204ENST00000492601 RBMY1EA6NEQ0 496 aaKnown RBP12.98□□□□□ -0.33
SGMS1-204ENST00000492601 RBMY1DP0C7P1 496 aaKnown RBP12.98□□□□□ -0.33
SGMS1-204ENST00000492601 ERVK-16P61578 105 aa12.98□□□□□ -0.33
SGMS1-204ENST00000492601 TM4SF20Q53R12 229 aa12.98□□□□□ -0.33
SGMS1-204ENST00000492601 ZNF57Q68EA5 555 aaPredicted RBP12.98□□□□□ -0.33
SGMS1-204ENST00000492601 LINC00322Q6ZN03 302 aaPredicted RBP12.98□□□□□ -0.33
SGMS1-204ENST00000492601 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
SGMS1-204ENST00000492601 UXS1Q8NBZ7 420 aa12.98□□□□□ -0.33
SGMS1-204ENST00000492601 TSPAN14Q8NG11 270 aa12.98□□□□□ -0.33
SGMS1-204ENST00000492601 BORCS5Q969J3 196 aa12.98□□□□□ -0.33
SGMS1-204ENST00000492601 HIPK2Q9H2X6 1198 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms