RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MRPL20Q9BYC9 149 aaKnown RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 BANF2Q9H503 90 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 GNB4Q9HAV0 340 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 PARP11Q9NR21 331 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 TPSG1Q9NRR2 321 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 SLC23A1Q9UHI7 598 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 FOXA2Q9Y261 457 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 WSB1Q9Y6I7 421 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 STAB2Q8WWQ8 2551 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 SAA2-SAA4A0A096LPE2 208 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 TRBV6-6A0A0A6YYG2 114 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 FABP12A6NFH5 140 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 RRHO14718 337 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 SAP30O75446 220 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 LY86O95711 162 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 NAPSAO96009 420 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 IFNA17P01571 189 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 HSPB1P04792 205 aaKnown RBP7.06□□□□□ -1.28
HDAC3-212ENST00000492407 SAA2P0DJI9 122 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-212ENST00000492407 MYF6P23409 242 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 BLVRBP30043 206 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-212ENST00000492407 FGF8P55075 233 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-212ENST00000492407 WNT4P56705 351 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 GNB1P62873 340 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 RPS27AP62979 156 aaKnown RBP7.06□□□□□ -1.28
HDAC3-212ENST00000492407 CX3CL1P78423 397 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 Q5BKY6 102 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 C1orf100Q5SVJ3 147 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 CASC10Q5T4H9 136 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 GLT8D1Q68CQ7 371 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 ZNF880Q6PDB4 577 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 ZNF562Q6V9R5 426 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 OR5AN1Q8NGI8 311 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 KCNG3Q8TAE7 436 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 DLX4Q92988 240 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-212ENST00000492407 RITA1Q96K30 269 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 ASCL2Q99929 193 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 TM2D1Q9BX74 207 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 IFI27L2Q9H2X8 130 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 ISYNA1Q9NPH2 558 aa7.06□□□□□ -1.28
HDAC3-212ENST00000492407 A0A1W2PPK0 400 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 SMIM30A4D0T7 59 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 H3BUA1 57 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 MYL12BO14950 172 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 UPK1BO75841 260 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 BRI3O95415 125 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 IFNA21P01568 189 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 CT45A6P0DMU7 189 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 CT45A5P0DMU8 189 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 CT45A7P0DMV0 189 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 GP9P14770 177 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 CELP19835 753 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 ETV6P41212 452 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 RAB5BP61020 215 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 GNMTQ14749 295 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 LEMD1Q68G75 181 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 SBSPONQ8IVN8 264 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 DHRSXQ8N5I4 330 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 PTX4Q96A99 478 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 RNF125Q96EQ8 232 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 RHOVQ96L33 236 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 RCHY1Q96PM5 261 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 OR4C12Q96R67 309 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 AGMATQ9BSE5 352 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 ELOVL1Q9BW60 279 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 DCSTAMPQ9H295 470 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 PSORS1C1Q9UIG5 152 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 WASHC3Q9Y3C0 194 aa7.05□□□□□ -1.28
HDAC3-212ENST00000492407 RYR2Q92736 4967 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 A0A0G2JLM5 398 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 H0YJW9 148 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 K7EQM0 130 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 SOX15O60248 233 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 FRMD6-AS1P0C7T7 363 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 EGR2P11161 476 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-212ENST00000492407 SPNP16150 400 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 HIST1H1BP16401 226 aaKnown RBP7.04□□□□□ -1.28
HDAC3-212ENST00000492407 ZBTB25P24278 435 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 CNTFRP26992 372 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 HLA-DMAP28067 261 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 AQP4P55087 323 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 RAB11AP62491 216 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 PITPNAQ00169 270 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 RAB11BQ15907 218 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 ACSM3Q53FZ2 586 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 TEX261Q6UWH6 196 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 HSD17B13Q7Z5P4 300 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-212ENST00000492407 PPP1R27Q86WC6 154 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 ZFP41Q8N8Y5 198 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 FBLIM1Q8WUP2 373 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 CYGBQ8WWM9 190 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 SAT2Q96F10 170 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-212ENST00000492407 HYLS1Q96M11 299 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 SULT4A1Q9BR01 284 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 FAAP24Q9BTP7 215 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 TMEM59Q9BXS4 323 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 HSF4Q9ULV5 492 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 STUB1Q9UNE7 303 aa7.04□□□□□ -1.28
HDAC3-212ENST00000492407 FBXO7Q9Y3I1 522 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms