RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 OR2B8PP59922 312 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 ADORA2A-AS1P86434 159 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 BSXQ3C1V8 233 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 ZNF672Q499Z4 452 aaPredicted RBP8.77□□□□□ -1.01
USP4-214ENST00000491791 OR8G2PQ6IF36 304 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 RBMS3Q6XE24 437 aaKnown RBP8.77□□□□□ -1.01
USP4-214ENST00000491791 SLC35E3Q7Z769 313 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 OR4A5Q8NH83 315 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 C8orf46Q8TAG6 207 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 TMEM170AQ8WVE7 144 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 DYNLRB1Q9NP97 96 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 LSM4Q9Y4Z0 139 aaKnown RBP8.77□□□□□ -1.01
USP4-214ENST00000491791 UBE2L5PA0A1B0GUS4 154 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 MEX3AA1L020 520 aaKnown RBP8.76□□□□□ -1.01
USP4-214ENST00000491791 B4DEV8 164 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 J3QR06 171 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 CCL21O00585 134 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 NUPL2O15504 423 aaKnown RBP8.76□□□□□ -1.01
USP4-214ENST00000491791 CYB5BO43169 146 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 RBMXL2O75526 392 aaKnown RBP8.76□□□□□ -1.01
USP4-214ENST00000491791 ATF4P18848 351 aaPredicted RBP8.76□□□□□ -1.01
USP4-214ENST00000491791 NFYBP25208 207 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 RAB11AP62491 216 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 PRCDQ00LT1 54 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 AWAT1Q58HT5 328 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 ACSM6Q6P461 480 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 FAM122CQ6P4D5 195 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 CBLN2Q8IUK8 224 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 ZCCHC24Q8N2G6 241 aaKnown RBP8.76□□□□□ -1.01
USP4-214ENST00000491791 C11orf42Q8N5U0 333 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 OR5B3Q8NH48 314 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 CA5BP1Q8WTZ4 195 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 CCL17Q92583 94 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 ACTR3CQ9C0K3 210 aaPredicted RBP8.76□□□□□ -1.01
USP4-214ENST00000491791 HEYLQ9NQ87 328 aaPredicted RBP8.76□□□□□ -1.01
USP4-214ENST00000491791 KCNIP2Q9NS61 270 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 TMEM242Q9NWH2 141 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 CTSZQ9UBR2 303 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 VAX2Q9UIW0 290 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 FBN2P35556 2912 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 F8P00451 2351 aa8.76□□□□□ -1.01
USP4-214ENST00000491791 TRAV3A0A0B4J244 114 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 MAP1LC3B2A6NCE7 125 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 CXorf65A6NEN9 183 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 H0YJW9 148 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 DVL1O14640 695 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 SIAH2O43255 324 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 KBTBD11O94819 623 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 IGKV1D-33P01593 117 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 IGKV1-33P01594 117 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 MT-ND4LP03901 98 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 FGF7P21781 194 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 OPRK1P41145 380 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 TFF3Q07654 80 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 PNRC1Q12796 327 aaPredicted RBP8.75□□□□□ -1.01
USP4-214ENST00000491791 TMEM88Q6PEY1 159 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 LYPD2Q6UXB3 125 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 ZNF841Q6ZN19 808 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 ETV3LQ6ZN32 361 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 PDPNQ86YL7 162 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 ZNF709Q8N972 641 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 OR13D1Q8NGV5 346 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 OR9G1Q8NH87 305 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 ITLN2Q8WWU7 325 aaPredicted RBP8.75□□□□□ -1.01
USP4-214ENST00000491791 NEUROG1Q92886 237 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 LEAP2Q969E1 77 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 MALSU1Q96EH3 234 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 NEIL1Q96FI4 390 aaPredicted RBP8.75□□□□□ -1.01
USP4-214ENST00000491791 YPEL4Q96NS1 127 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 MAP1LC3BQ9GZQ8 125 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 NPVFQ9HCQ7 196 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 MANBALQ9NQG1 85 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 SLC35D1Q9NTN3 355 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 SLC39A9Q9NUM3 307 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 PKDREJQ9NTG1 2253 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 CCDC168Q8NDH2 2452 aa8.75□□□□□ -1.01
USP4-214ENST00000491791 A0A1W2PPE3 182 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 TMEM250H0YL14 139 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 H3BQ15 152 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 RRHO14718 337 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 IFNA10P01566 189 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 IGHV2-70P01814 119 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 APOA2P02652 100 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
USP4-214ENST00000491791 MC5RP33032 325 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 PSMB3P49720 205 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 ACOT6Q3I5F7 207 aaPredicted RBP8.74□□□□□ -1.01
USP4-214ENST00000491791 C2orf83Q53S99 150 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 FAM90A2PQ658T7 463 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 TREML4Q6UXN2 200 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 SSX7Q7RTT5 188 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 MUC15Q8N387 334 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 OR10G9Q8NGN4 311 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 OR10G7Q8NGN6 311 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 VSTM2AQ8TAG5 236 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 LINC01560Q8TB33 94 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 TMEM167AQ8TBQ9 72 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 TVP23CQ96ET8 276 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 NABP2Q9BQ15 211 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms